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status of python on x86_64

Problems with emerge or ebuilds? Have a basic programming question about C, PHP, Perl, BASH or something else?
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risa2000
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status of python on x86_64

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Post by risa2000 » Fri Dec 10, 2010 9:06 pm

Running gentoo on x86_64 system (full specs are at the end of message). Recently I noticed that the version of python (2.6.5) is not reported anymore by "default" emerge. Only version 3.x (which is also installed, but not set as default) is advertised:

Code: Select all

core-i3 risa # emerge -pv python

These are the packages that would be merged, in order:

Calculating dependencies... done!
[ebuild   R   ] dev-lang/python-3.1.2-r4  USE="doc gdbm ncurses readline ssl threads (wide-unicode) xml -build -examples -ipv6 -sqlite -tk -wininst" 0 kB

Total: 1 package (1 reinstall), Size of downloads: 0 kB
When I run eselect though it admits python2.6 is default:

Code: Select all

core-i3 risa # eselect python list
Available Python interpreters:
  [1]   python2.6 *
  [2]   python3.1
I wonder, if emerge should also report both Python versions when doing emerge -py python and also if the different versions should be installed in different slots?
Of course I can "force" emerge to admit there is python2.6 installed by:

Code: Select all

core-i3 risa # emerge -pv "<dev-lang/python-2.7"

These are the packages that would be merged, in order:

Calculating dependencies... done!
[ebuild   R   ] dev-lang/python-2.6.5-r3  USE="berkdb doc gdbm ncurses readline ssl threads (wide-unicode) xml -build -examples -ipv6 -sqlite -tk -wininst" 0 kB

Total: 1 package (1 reinstall), Size of downloads: 0 kB
But the fact that it is completely ignored with "standard" emerge seems strange to me.

I have also noticed in some post here that "eselect python" is supposed to be deprecated and "USE_PYTHON" should be used instead, but I could not find any clear explanation about it.

And finally, I would like to emerge python 2.7.1 (in parallel to 2.6.5), because I need it for my work, leaving 2.6.5 as default one. Is it safe? Because, interestingly, when I simply unmask 2.7.1 in portage and try:

Code: Select all

core-i3 risa # emerge -pv "<dev-lang/python-3.0"

These are the packages that would be merged, in order:

Calculating dependencies... done!
[ebuild  NS   ] dev-lang/python-2.7.1 [2.6.5-r3, 3.1.2-r4] USE="doc gdbm ncurses readline ssl threads (wide-unicode) xml -berkdb -build -examples -ipv6 -sqlite -tk -wininst" 0 kB

Total: 1 package (1 in new slot), Size of downloads: 0 kB
It suddenly shows new install (in new slot) and also correctly indicates both already installed versions (which was never case in all previous examples above).

EDIT (2010-12-11): Following problem has already been solved - see follow ups

Unfortunately, when I run it it fails pretty fast with:

Code: Select all

core-i3 risa # emerge  "<dev-lang/python-3.0"
Calculating dependencies... done!

>>> Verifying ebuild manifests

>>> Emerging (1 of 1) dev-lang/python-2.7.1
 * Python-2.7.1.tar.bz2 RMD160 SHA1 SHA256 size ;-) ...                                                [ ok ]
 * python-gentoo-patches-2.7.1.tar.bz2 RMD160 SHA1 SHA256 size ;-) ...                                 [ ok ]
 * Package:    dev-lang/python-2.7.1
 * Repository: gentoo
 * Maintainer: python@gentoo.org
 * USE:  amd64 doc elibc_glibc gdbm kernel_linux multilib ncurses readline ssl threads userland_GNU wide-unicode xml
>>> Unpacking source...
>>> Unpacking Python-2.7.1.tar.bz2 to /var/tmp/portage/dev-lang/python-2.7.1/work
>>> Unpacking python-gentoo-patches-2.7.1.tar.bz2 to /var/tmp/portage/dev-lang/python-2.7.1/work
>>> Source unpacked in /var/tmp/portage/dev-lang/python-2.7.1/work
>>> Preparing source in /var/tmp/portage/dev-lang/python-2.7.1/work/Python-2.7.1 ...
 * Applying various patches (bugfixes/updates) ...
 *   01_all_static_library_location.patch ...                                                          [ ok ]
 *   02_all_disable_modules_and_ssl.patch ...                                                          [ ok ]
 *   03_all_add_portage_search_path.patch ...                                                          [ ok ]
 *   04_all_libdir.patch ...                                                                           [ ok ]
 *   05_all_verbose_building_of_extensions.patch ...                                                   [ ok ]
 *   06_all_non-zero_exit_status_on_failure.patch ...                                                  [ ok ]
 *   07_all_loadable_sqlite_extensions.patch ...                                                       [ ok ]
 *   21_all_distutils_c++.patch ...                                                                    [ ok ]
 *   22_all_turkish_locale.patch ...                                                                   [ ok ]
 *   23_all_arm_OABI.patch ...                                                                         [ ok ]
 *   61_all_process_data.patch ...                                                                     [ ok ]
 * Done with patching
 * Running eautoreconf in '/var/tmp/portage/dev-lang/python-2.7.1/work/Python-2.7.1' ...
 * Running aclocal ...                                                                                 [ ok ]
 * Running autoconf ...                                                                                [ ok ]
 * Running autoheader ...                                                                              [ !! ]
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/dev-lang/python-2.7.1/work/Python-2.7.1 ...
 * Disabled modules:  _bsddb _sqlite3 _tkinter
./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64 --with-fpectl --enable-shared --disable-ipv6 --with-threads --enable-unicode=ucs4 --infodir=${prefix}/share/info --mandir=${prefix}/share/man --with-dbmliborder=gdbm --with-libc= --enable-loadable-sqlite-extensions --with-system-expat --with-system-ffi
checking for --enable-universalsdk... no
checking for --with-universal-archs... 32-bit
checking MACHDEP... linux2
checking EXTRAPLATDIR...
checking machine type as reported by uname -m... x86_64
checking for --without-gcc... no
checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes
checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed
checking for --with-cxx-main=<compiler>... no
configure: error: cannot run /bin/sh ./config.sub

!!! Please attach the following file when seeking support:
!!! /var/tmp/portage/dev-lang/python-2.7.1/work/Python-2.7.1/config.log
 * ERROR: dev-lang/python-2.7.1 failed:
 *   econf failed
 *
 * Call stack:
 *     ebuild.sh, line   56:  Called src_configure
 *   environment, line 5502:  Called econf '--with-fpectl' '--enable-shared' '--disable-ipv6' '--with-threads' '--enable-unicode=ucs4' '--infodir=${prefix}/share/info' '--mandir=${prefix}/share/man' '--with-dbmliborder=gdbm' '--with-libc=' '--enable-loadable-sqlite-extensions' '--with-system-expat' '--with-system-ffi'
 *     ebuild.sh, line  552:  Called die
 * The specific snippet of code:
 *                      die "econf failed"
 *
 * If you need support, post the output of 'emerge --info =dev-lang/python-2.7.1',
 * the complete build log and the output of 'emerge -pqv =dev-lang/python-2.7.1'.
 * The complete build log is located at '/var/tmp/portage/dev-lang/python-2.7.1/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/dev-lang/python-2.7.1/temp/environment'.
 * S: '/var/tmp/portage/dev-lang/python-2.7.1/work/Python-2.7.1'
Since I have seen several messages about people having 2.7.1 installed I am not sure it is really problem with ebuild, but probably some other problem with my whole python "ecosystem".

Any comment on any part of this probably disjointed message is welcome :).

---
System specs:

Code: Select all

Portage 2.1.9.24 (default/linux/amd64/10.0, gcc-4.4.4, glibc-2.12.1-r3, 2.6.36.1 x86_64)
=================================================================
System uname: Linux-2.6.36.1-x86_64-Intel-R-_Core-TM-_i3_CPU_530_@_2.93GHz-with-gentoo-1.12.14
Timestamp of tree: Fri, 10 Dec 2010 04:45:02 +0000
ccache version 2.4 [enabled]
app-shells/bash:     4.1_p7
dev-lang/python:     2.6.5-r3, 3.1.2-r4
dev-util/ccache:     2.4-r7
sys-apps/baselayout: 1.12.14-r1
sys-apps/sandbox:    2.3-r1
sys-devel/autoconf:  2.65-r1
sys-devel/automake:  1.10.3, 1.11.1
sys-devel/binutils:  2.20.1-r1
sys-devel/gcc:       4.4.4-r2
sys-devel/gcc-config: 1.4.1
sys-devel/libtool:   2.2.10
sys-devel/make:      3.81-r2
virtual/os-headers:  2.6.27-r2 (sys-kernel/linux-headers) <--- this is not relevant (actual kernel headers are used)
ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="* -@EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/openvpn/easy-rsa"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/udev/rules.d"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FEATURES="assume-digests binpkg-logs ccache distlocks fixlafiles fixpackages news parallel-fetch protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch"
GENTOO_MIRRORS="http://gentoo.mirror.web4u.cz http://gentoo.wheel.sk http://gentoo.supp.name"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j5"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
SYNC="rsync://rsync.europe.gentoo.org/gentoo-portage"
USE="acpi amd64 apache2 berkdb bzip2 cli cracklib crypt cxx fam gdbm gpm iconv iproute2 lm_sensors mmx modules mudflap multilib ncurses nls nptl nptlonly openmp pam pcre perl python readline session snmp sse sse2 ssl sysfs tcpd unicode vim-syntax zlib" ALSA_CARDS="hda-intel" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgid dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif so speling status unique_id userdir usertrack vhost_alias" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="ncurses text" PHP_TARGETS="php5-2" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="fbdev intel" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, LANG, LC_ALL, LINGUAS, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PORTDIR_OVERLAY
Last edited by risa2000 on Sat Dec 11, 2010 11:17 am, edited 1 time in total.
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BigDaveyL
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Post by BigDaveyL » Fri Dec 10, 2010 9:08 pm

Try removing autogen, install python 2.7 and then re-install autogen.

I think there was a bug report about this.
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risa2000
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Posts: 35
Joined: Sun Oct 17, 2004 3:34 pm

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Post by risa2000 » Fri Dec 10, 2010 9:18 pm

BigDaveyL wrote:Try removing autogen, install python 2.7 and then re-install autogen.

I think there was a bug report about this.
Yep, you were right. Thanks! Problem with emerging python-2.7.1 solved. What was strange, when I tried emerge -pv autogen on the original config it showed there will be an update from autogen 5.11.1 to 5.11.3. This update was never indicated before by emerge -DNupv world.
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VoidMage
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Post by VoidMage » Fri Dec 10, 2010 9:53 pm

Simply '--with-bdeps y'.
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tuXXX
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Post by tuXXX » Sat Dec 11, 2010 6:43 pm

Upgrading from autogen 5.11.1 to 5.11.3 solved the problem for me.

See http://bugs.gentoo.org/show_bug.cgi?id=348443
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