how to fix broken repos?

Message

prehonor · Post by **prehonor** » Tue Nov 19, 2019 9:05 am

I removed the folder /var/db/repos/gentoo/media-video/ffmpeg , and executed the command 'emerge -av media-video'
it said 'emerge: there are no ebuilds to satisfy "media-video".'
what can I do ?

Post by **fedeliallalinea** » Tue Nov 19, 2019 9:09 am

Re-sync tree usually is the way

prehonor · Post by **prehonor** » Tue Nov 19, 2019 10:13 am

fedeliallalinea wrote:Re-sync tree usually is the way

You mean "emerge --sync" ?

fturco · Post by **fturco** » Tue Nov 19, 2019 10:25 am

emerge --sync is fine, but you can also use emaint sync -a or emaint sync -r gentoo.

Anyway you shouldn't remove or modify files from the main Gentoo repository (/var/db/repos/gentoo). Any modification would be lost when you sync again.

Running emerge -av media-video is also wrong, because specifying a category without a package name is not enough for portage.
You should either specify the package name only (if it's unique), or specify both the category and the package name:

Code: Select all

emerge -av ffmpeg # package name only
emerge -av media-video/ffmpeg # category plus package name

Also, may I ask you why you deleted the /var/db/repos/gentoo/media-video/ffmpeg directory in the first place? What are you trying to accomplish?

Post by **fedeliallalinea** » Tue Nov 19, 2019 10:32 am

prehonor wrote:You mean "emerge --sync" ?

Exactly, this overwrite any modification you made

prehonor · Post by **prehonor** » Tue Nov 19, 2019 10:41 am

fturco wrote:emerge --sync is fine, but you can also use emaint sync -a or emaint sync -r gentoo.

Anyway you shouldn't remove or modify files from the main Gentoo repository (/var/db/repos/gentoo). Any modification would be lost when you sync again.

Running emerge -av media-video is also wrong, because specifying a category without a package name is not enough for portage.
You should either specify the package name only (if it's unique), or specify both the category and the package name:
Code: Select all
emerge -av ffmpeg # package name only
emerge -av media-video/ffmpeg # category plus package name
Also, may I ask you why you deleted the /var/db/repos/gentoo/media-video/ffmpeg directory in the first place? What are you trying to accomplish?

I want to fix viewtopic-t-1104328-highlight-.html by removing and adding the folder ffmpeg. Now , I know it's a wrong way.

Now, I have executed "emaint sync -r gentoo" ,but there is not the folder "ffmpeg" in /var/db/repos/gentoo/media-video

prehonor · Post by **prehonor** » Tue Nov 19, 2019 10:48 am

fedeliallalinea wrote:
prehonor wrote:You mean "emerge --sync" ?
Exactly, this overwrite any modification you made

I have executed "emaint sync -r gentoo" ,but there is not the folder "ffmpeg" in /var/db/repos/gentoo/media-video

Post by **fedeliallalinea** » Tue Nov 19, 2019 10:56 am

prehonor wrote:I have executed "emaint sync -r gentoo" ,but there is not the folder "ffmpeg" in /var/db/repos/gentoo/media-video

You can post the command output?

prehonor · Post by **prehonor** » Tue Nov 19, 2019 11:09 am

fedeliallalinea wrote:
prehonor wrote:I have executed "emaint sync -r gentoo" ,but there is not the folder "ffmpeg" in /var/db/repos/gentoo/media-video
You can post the command output?

Code: Select all

>>> Syncing repository 'gentoo' into '/var/db/repos/gentoo'...
[32;01m * [39;49;00mUsing keys from /usr/share/openpgp-keys/gentoo-release.asc
[32;01m * [39;49;00mRefreshing keys via WKD ...                                           [34;01m[ [39;49;00m[32;01mok[39;49;00m[34;01m ][39;49;00m
 _______________________________________________________________
|         University of Science and Technology of China         |
|           Open Source Mirror  (mirrors.ustc.edu.cn)           |
|===============================================================|
|                                                               |
|    We mirror a great many OSS projects & Linux distros.       |
|                                                               |
| Currently we don't limit speed. To prevent overload, Each IP  |
| is only allowed to start upto 2 concurrent rsync connections. |
|                                                               |
| This site also provides http/https/ftp access.                |
|                                                               |
| Supported by USTC Network Information Center                  |
|          and USTC Linux User Group (http://lug.ustc.edu.cn/). |
|                                                               |
|    Sync Status:  https://mirrors.ustc.edu.cn/status/          |
|           News:  https://servers.ustclug.org/                 |
|        Contact:  lug@ustc.edu.cn                              |
|                                                               |
|_______________________________________________________________|


receiving incremental file list
timestamp.chk

Number of files: 1 (reg: 1)
Number of created files: 0
Number of deleted files: 0
Number of regular files transferred: 1
Total file size: 32 bytes
Total transferred file size: 32 bytes
Literal data: 32 bytes
Matched data: 0 bytes
File list size: 41
File list generation time: 0.001 seconds
File list transfer time: 0.000 seconds
Total bytes sent: 104
Total bytes received: 132

sent 104 bytes  received 132 bytes  472.00 bytes/sec
total size is 32  speedup is 0.14
>>> Starting rsync with rsync://202.141.176.110/gentoo-portage...
>>> Checking server timestamp ...
 _______________________________________________________________
|         University of Science and Technology of China         |
|           Open Source Mirror  (mirrors.ustc.edu.cn)           |
|===============================================================|
|                                                               |
|    We mirror a great many OSS projects & Linux distros.       |
|                                                               |
| Currently we don't limit speed. To prevent overload, Each IP  |
| is only allowed to start upto 2 concurrent rsync connections. |
|                                                               |
| This site also provides http/https/ftp access.                |
|                                                               |
| Supported by USTC Network Information Center                  |
|          and USTC Linux User Group (http://lug.ustc.edu.cn/). |
|                                                               |
|    Sync Status:  https://mirrors.ustc.edu.cn/status/          |
|           News:  https://servers.ustclug.org/                 |
|        Contact:  lug@ustc.edu.cn                              |
|                                                               |
|_______________________________________________________________|


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net-mail/Manifest.gz
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net-mail/t-prot/metadata.xml
net-misc/Manifest.gz
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net-misc/autossh/metadata.xml
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net-misc/proxychains/metadata.xml
net-misc/proxychains/proxychains-4.14.ebuild
net-misc/proxychains/files/proxychains-4.14-makefile.patch
net-misc/whois/Manifest
net-misc/whois/whois-5.5.3.ebuild
net-news/Manifest.gz
net-news/newsboat/Manifest
net-news/newsboat/metadata.xml
net-print/Manifest.gz
deleting net-vpn/tor/tor-0.4.2.3_alpha.ebuild
deleting net-wireless/dump1090/files/gmap_usr_share_mv.patch
net-print/sshlpr/Manifest
deleting net-wireless/dump1090/files/
net-print/sshlpr/metadata.xml
net-print/sshlpr/sshlpr-1.ebuild
net-proxy/Manifest.gz
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net-proxy/sshuttle/metadata.xml
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net-vpn/tor/tor-0.4.2.4_rc.ebuild
net-wireless/Manifest.gz
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profiles/Manifest.gz
profiles/package.mask
profiles/use.local.desc
profiles/arch/hppa/use.mask
profiles/updates/4Q-2019
deleting sci-electronics/systemc/files/systemc-2.3.0-config.patch
deleting sci-electronics/systemc/files/
sci-electronics/Manifest.gz
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sci-geosciences/Manifest.gz
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sci-geosciences/qgis/qgis-3.4.12.ebuild
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deleting sci-libs/libcerf/files/
sci-libs/Manifest.gz
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sys-apps/Manifest.gz
deleting sys-apps/portage/portage-2.3.78-r2.ebuild
deleting sys-apps/shadow/shadow-4.7-r2.ebuild
sys-apps/pcsc-tools/Manifest
sys-apps/pcsc-tools/pcsc-tools-1.5.3.ebuild
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sys-devel/binutils/Manifest
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deleting sys-fs/dislocker/dislocker-0.7.1-r1.ebuild
sys-fs/Manifest.gz
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deleting sys-fs/fuse/fuse-2.9.9.ebuild
sys-fs/archivemount/Manifest
sys-fs/archivemount/archivemount-0.8.12.ebuild
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sys-fs/xfsprogs/files/xfsprogs-5.3.0-libdir.patch
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deleting sys-libs/libseccomp/libseccomp-2.4.2.ebuild
sys-libs/Manifest.gz
sys-libs/libhugetlbfs/Manifest
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sys-libs/libseccomp/libseccomp-2.4.2-r1.ebuild
sys-libs/libseccomp/files/
sys-libs/libseccomp/files/libseccomp-2.4.2-missing_SNR_ppoll_defs.patch
sys-libs/uclibc-ng/Manifest
sys-libs/uclibc-ng/uclibc-ng-1.0.32.ebuild
sys-process/Manifest.gz
sys-process/incron/Manifest
sys-process/incron/incron-0.5.12_p20191114.ebuild
deleting www-apps/icingaweb2/icingaweb2-2.6.3.ebuild
www-apps/Manifest.gz
www-apps/icingaweb2/Manifest
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deleting x11-drivers/nvidia-drivers/nvidia-drivers-440.26.ebuild
deleting x11-drivers/nvidia-drivers/nvidia-drivers-430.50.ebuild
x11-apps/Manifest.gz
x11-apps/xkbprint/Manifest
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x11-drivers/nvidia-drivers/nvidia-drivers-430.64.ebuild
x11-drivers/nvidia-drivers/nvidia-drivers-440.31.ebuild
x11-drivers/xf86-video-amdgpu/Manifest
x11-drivers/xf86-video-amdgpu/xf86-video-amdgpu-19.1.0.ebuild
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x11-misc/Manifest.gz
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x11-wm/icewm/Manifest
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x11-wm/icewm/metadata.xml

Number of files: 160,518 (reg: 133,604, dir: 26,914)
Number of created files: 142 (reg: 135, dir: 7)
Number of deleted files: 166 (reg: 157, dir: 9)
Number of regular files transferred: 757
Total file size: 215.97M bytes
Total transferred file size: 7.40M bytes
Literal data: 7.40M bytes
Matched data: 0 bytes
File list size: 3.74M
File list generation time: 0.001 seconds
File list transfer time: 0.000 seconds
Total bytes sent: 44.04K
Total bytes received: 11.40M

sent 44.04K bytes  received 11.40M bytes  532.40K bytes/sec
total size is 215.97M  speedup is 18.87
[32;01m * [39;49;00mManifest timestamp: 2019-11-18 23:38:56 UTC
[32;01m * [39;49;00mValid OpenPGP signature found:
[32;01m * [39;49;00m- primary key: DCD05B71EAB94199527F44ACDB6B8C1F96D8BF6D
[32;01m * [39;49;00m- subkey: E1D6ABB63BFCFB4BA02FDF1CEC590EEAC9189250
[32;01m * [39;49;00m- timestamp: 2019-11-18 23:38:56 UTC
[32;01m * [39;49;00mVerifying /var/db/repos/gentoo/.tmp-unverified-download-quarantine ...Reading Portage settings...
Building database (/var/cache/eix/portage.eix)...
[0] "gentoo" /var/db/repos/gentoo/ (cache: metadata-md5-or-flat)
     Reading up to 173 categories of packages...Finished
[1] "calculate" /var/lib/layman/calculate (cache: parse|ebuild*#metadata-md5#metadata-flat#assign)
     Reading up to 173 categories of packages...Finished
[2] "gentoo-zh" /var/lib/layman/gentoo-zh (cache: parse|ebuild*#metadata-md5#metadata-flat#assign)
     Reading up to 173 categories of packages...Finished
[3] "qt" /var/lib/layman/qt (cache: parse|ebuild*#metadata-md5#metadata-flat#assign)
     Reading up to 173 categories of packages...Finished
[4] "steam-overlay" /home/prehonor/portage/steam-overlay (cache: parse|ebuild*#metadata-md5#metadata-flat#assign)
     Reading up to 173 categories of packages...Finished
Applying masks...
Calculating hash tables...
Writing database file /var/cache/eix/portage.eix...
Database contains 19888 packages in 173 categories

Action: sync for repo: gentoo, returned code = 1

I have executed "emaint sync -r gentoo" again.
There is an error :

Code: Select all

x11-wm/icewm/icewm-1.6.2-r1.ebuild
x11-wm/icewm/metadata.xml

Number of files: 160,518 (reg: 133,604, dir: 26,914)
Number of created files: 142 (reg: 135, dir: 7)
Number of deleted files: 166 (reg: 157, dir: 9)
Number of regular files transferred: 757
Total file size: 215.97M bytes
Total transferred file size: 7.40M bytes
Literal data: 7.40M bytes
Matched data: 0 bytes
File list size: 3.63M
File list generation time: 0.001 seconds
File list transfer time: 0.000 seconds
Total bytes sent: 44.03K
Total bytes received: 11.40M

sent 44.03K bytes  received 11.40M bytes  416.24K bytes/sec
total size is 215.97M  speedup is 18.87
 * Manifest timestamp: 2019-11-18 23:38:56 UTC
 * Valid OpenPGP signature found:
 * - primary key: DCD05B71EAB94199527F44ACDB6B8C1F96D8BF6D
 * - subkey: E1D6ABB63BFCFB4BA02FDF1CEC590EEAC9189250
 * - timestamp: 2019-11-18 23:38:56 UTC
 * Verifying /var/db/repos/gentoo/.tmp-unverified-download-quarantine ...!!! Manifest verification failed:
Manifest mismatch for dev-python/Manifest.gz
  __size__: expected: 309429, have: 309441
Reading Portage settings...
Building database (/var/cache/eix/portage.eix)...
[0] "gentoo" /var/db/repos/gentoo/ (cache: metadata-md5-or-flat)
     Reading category 173|173 (100) Finished             
[1] "calculate" /var/lib/layman/calculate (cache: parse|ebuild*#metadata-md5#metadata-flat#assign)
     Reading category 173|173 (100) Finished         
[2] "gentoo-zh" /var/lib/layman/gentoo-zh (cache: parse|ebuild*#metadata-md5#metadata-flat#assign)
     Reading category 173|173 (100) Finished             
[3] "qt" /var/lib/layman/qt (cache: parse|ebuild*#metadata-md5#metadata-flat#assign)
     Reading category 173|173 (100) Finished         
[4] "steam-overlay" /home/prehonor/portage/steam-overlay (cache: parse|ebuild*#metadata-md5#metadata-flat#assign)
     Reading category 173|173 (100) Finished       
Applying masks...
Calculating hash tables...
Writing database file /var/cache/eix/portage.eix...
Database contains 19888 packages in 173 categories

Action: sync for repo: gentoo, returned code = 1

charles17 · Post by **charles17** » Tue Nov 19, 2019 11:28 am

And now, what about

Code: Select all

ls -al /var/db/repos/gentoo/media-video/ffmpeg
emerge -pvt ffmpeg

prehonor · Post by **prehonor** » Tue Nov 19, 2019 11:32 am

charles17 wrote:And now, what about
Code: Select all
ls -al /var/db/repos/gentoo/media-video/ffmpeg
emerge -pvt ffmpeg

The result of "ls -al /var/db/repos/gentoo/media-video/ffmpeg" is

Code: Select all

ls: cannot access '/var/db/repos/gentoo/media-video/ffmpeg': No such file or directory

Another,

Code: Select all

╭─root@Gentoo-ryx /var/db/repos/gentoo/media-video
╰─# emerge -pvt ffmpeg                                                                                         

These are the packages that would be merged, in reverse order:

Calculating dependencies... done!

emerge: there are no ebuilds to satisfy "ffmpeg".

charles17 · Post by **charles17** » Tue Nov 19, 2019 12:08 pm

Ok, Instead of long searching the bug, try su -c "eselect repository remove gentoo", make sure there is no [gentoo] section in /etc/portage/repos.conf and then sync again.

prehonor · Post by **prehonor** » Tue Nov 19, 2019 1:09 pm

charles17 wrote:Ok, Instead of long searching the bug, try su -c "eselect repository remove gentoo", make sure there is no [gentoo] section in /etc/portage/repos.conf and then sync again.

I changed the "sync-uri" in the /etc/portage/repos.conf/gentoo.conf :

Code: Select all

...
sync-uri = rsync://rsync.gentoo.org/gentoo-portage
#sync-uri = rsync://rsync.mirrors.ustc.edu.cn/gentoo-portage
...

It solved my problem.
I dont know why.

I found
When use the sync-uri rsync://rsync.gentoo.org/gentoo-portage , the output is

Code: Select all


sent 30.86K bytes  received 4.23M bytes  29.91K bytes/sec
total size is 216.02M  speedup is 50.69
 * Manifest timestamp: 2019-11-19 12:38:56 UTC
 * Valid OpenPGP signature found:
 * - primary key: DCD05B71EAB94199527F44ACDB6B8C1F96D8BF6D
 * - subkey: E1D6ABB63BFCFB4BA02FDF1CEC590EEAC9189250
 * - timestamp: 2019-11-19 12:38:56 UTC
 * Verifying /var/db/repos/gentoo/.tmp-unverified-download-quarantine ...                                    [ ok ]
=== Sync completed for gentoo
Reading Portage settings...
Building database (/var/cache/eix/portage.eix)...
[0] "gentoo" /var/db/repos/gentoo/ (cache: metadata-md5-or-flat)
     Reading category 173|173 (100) Finished             
[1] "calculate" /var/lib/layman/calculate (cache: parse|ebuild*#metadata-md5#metadata-flat#assign)
     Reading category 173|173 (100) Finished         
[2] "gentoo-zh" /var/lib/layman/gentoo-zh (cache: parse|ebuild*#metadata-md5#metadata-flat#assign)
     Reading category 173|173 (100) Finished             
[3] "qt" /var/lib/layman/qt (cache: parse|ebuild*#metadata-md5#metadata-flat#assign)
     Reading category 173|173 (100) Finished         
[4] "steam-overlay" /home/prehonor/portage/steam-overlay (cache: parse|ebuild*#metadata-md5#metadata-flat#assign)
     Reading category 173|173 (100) Finished       
Applying masks...
Calculating hash tables...
Writing database file /var/cache/eix/portage.eix...
Database contains 19892 packages in 173 categories

Action: sync for repo: gentoo, returned code = 0

the big difference is that
"Action: sync for repo: gentoo, returned code = 0"

charles17 · Post by **charles17** » Tue Nov 19, 2019 1:17 pm

Glad to here that problem is solved.

sync-uri = rsync://rsync.gentoo.org/gentoo-portage is default. So no [gentoo] section at all is needed in /etc/portage/repos.conf.