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hanj
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Joined: 19 Aug 2003
Posts: 1426
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 Posted: Sun Oct 21, 2018 3:47 pm Post subject: Unable to build mysql-5.7.23-r2 [SOLVED] |
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This morning, I'm trying to build mysql-5.7.23-r2, and on 3 separate boxes, they are failing at the same point:
| Code: | [ 84%] Building CXX object sql/CMakeFiles/sql.dir/item_geofunc_buffer.cc.o
cd /var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql-5.7.23_build/sql && /usr/bin/x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -DHAVE_LIBEVENT2 -DHAVE_OPENSSL -DHAVE_REPLICATION -DMYSQL_SERVER -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -I/var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql-5.7.23_build/include -I/var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql/extra/rapidjson/include -I/var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql-5.7.23_build/libbinlogevents/include -I/var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql/libbinlogevents/export -I/var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql/include -I/var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql/sql/conn_handler -I/var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql/libbinlogevents/include -I/var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql/sql -I/var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql/sql/auth -I/var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql/regex -I/var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql-5.7.23_build/sql -isystem /var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql/include/boost_1_59_0/patches -isystem /var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql/boost/boost_1_59_0 -O2 -pipe -felide-constructors -fno-strict-aliasing -Wall -Wextra -Wformat-security -Wvla -Woverloaded-virtual -Wno-unused-parameter -DNDEBUG -DDBUG_OFF -fPIC -Wno-unused-local-typedefs -Wno-misleading-indentation -o CMakeFiles/sql.dir/item_geofunc_buffer.cc.o -c /var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql/sql/item_geofunc_buffer.cc
In file included from /var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql/sql/item_geofunc.cc:26:0:
/var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql/sql/sql_class.h:2240:8: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Transaction_ctx> m_transaction;
^~~~~~~~
In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/6.4.0/include/g++-v6/memory:81:0,
from /var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql/sql/spatial.h:29,
from /var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql/sql/item_geofunc.h:24,
from /var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql/sql/item_geofunc.cc:23:
/usr/lib/gcc/x86_64-pc-linux-gnu/6.4.0/include/g++-v6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql/sql/item_geofunc_buffer.cc:26:0:
/var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql/sql/sql_class.h:2240:8: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Transaction_ctx> m_transaction;
^~~~~~~~
In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/6.4.0/include/g++-v6/memory:81:0,
from /var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql/sql/spatial.h:29,
from /var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql/sql/item_geofunc.h:24,
from /var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql/sql/item_geofunc_buffer.cc:24:
/usr/lib/gcc/x86_64-pc-linux-gnu/6.4.0/include/g++-v6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
virtual memory exhausted: Cannot allocate memory
make[2]: *** [sql/CMakeFiles/sql.dir/build.make:974: sql/CMakeFiles/sql.dir/item_geofunc_buffer.cc.o] Error 1
make[2]: *** Waiting for unfinished jobs....
make[2]: Leaving directory '/var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql-5.7.23_build'
make[1]: *** [CMakeFiles/Makefile2:5733: sql/CMakeFiles/sql.dir/all] Error 2
make[1]: Leaving directory '/var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql-5.7.23_build'
make: *** [Makefile:152: all] Error 2
* ERROR: dev-db/mysql-5.7.23-r2::gentoo failed (compile phase):
* emake failed
*
* If you need support, post the output of `emerge --info '=dev-db/mysql-5.7.23-r2::gentoo'`,
* the complete build log and the output of `emerge -pqv '=dev-db/mysql-5.7.23-r2::gentoo'`.
* The complete build log is located at '/var/log/builds/dev-db:mysql-5.7.23-r2:20181021-151716.log'.
* For convenience, a symlink to the build log is located at '/var/tmp/portage/dev-db/mysql-5.7.23-r2/temp/build.log'.
* The ebuild environment file is located at '/var/tmp/portage/dev-db/mysql-5.7.23-r2/temp/environment'.
* Working directory: '/var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql-5.7.23_build'
* S: '/var/tmp/portage/dev-db/mysql-5.7.23-r2/work/mysql'
>>> Failed to emerge dev-db/mysql-5.7.23-r2, Log file:
>>> '/var/log/builds/dev-db:mysql-5.7.23-r2:20181021-151716.log' |
I've never had an issue building mysql on these boxes in the past or ever get memory allocation errors in general? Is this a bug?
Here are my make.conf values..
| Code: | ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="* -@EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /etc/stunnel/stunnel.conf /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/gconf /etc/gentoo-release /etc/php/apache2-php7.0/ext-active/ /etc/php/apache2-php7.1/ext-active/ /etc/php/apache2-php7.2/ext-active/ /etc/php/cgi-php7.0/ext-active/ /etc/php/cgi-php7.1/ext-active/ /etc/php/cgi-php7.2/ext-active/ /etc/php/cli-php7.0/ext-active/ /etc/php/cli-php7.1/ext-active/ /etc/php/cli-php7.2/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -pipe"
DISTDIR="/usr/portage/distfiles"
ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync multilib-strict news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://mirror.rackspace.com/gentoo/"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LINGUAS="en"
MAKEOPTS="-j2"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp" |
Here are my USE flags for mysql:
| Code: | | [ebuild U ] dev-db/mysql-5.7.23-r2:0/18::gentoo [5.6.40-r2:0/18::gentoo] USE="latin1 perl server -cjk% (-client-libs) -cracklib -debug -experimental% -jemalloc -libressl -numa -profiling (-selinux) -static -static-libs -systemtap -tcmalloc -test -yassl" ABI_X86="(64) -32 (-x32)" 0 KiB |
Memory:
| Code: | cat /proc/meminfo
MemTotal: 1015748 kB
MemFree: 475188 kB
MemAvailable: 607932 kB
Buffers: 108848 kB
Cached: 163796 kB
SwapCached: 22068 kB
Active: 317160 kB
Inactive: 115148 kB
Active(anon): 133684 kB
Inactive(anon): 45752 kB
Active(file): 183476 kB
Inactive(file): 69396 kB
Unevictable: 0 kB
Mlocked: 0 kB
SwapTotal: 999996 kB
SwapFree: 728932 kB
Dirty: 2752 kB
Writeback: 0 kB
AnonPages: 147620 kB
Mapped: 48060 kB
Shmem: 19768 kB
Slab: 77460 kB
SReclaimable: 43504 kB
SUnreclaim: 33956 kB
KernelStack: 2268 kB
PageTables: 8308 kB
NFS_Unstable: 0 kB
Bounce: 0 kB
WritebackTmp: 0 kB
CommitLimit: 1507868 kB
Committed_AS: 683356 kB
VmallocTotal: 34359738367 kB
VmallocUsed: 0 kB
VmallocChunk: 0 kB
HardwareCorrupted: 0 kB
AnonHugePages: 51200 kB
ShmemHugePages: 0 kB
ShmemPmdMapped: 0 kB
DirectMap4k: 12288 kB
DirectMap2M: 1032192 kB |
I have a GB of Swap.
Thanks!
hanji
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Server Admin Blog - Uno-Code.com
Last edited by hanj on Sun Oct 21, 2018 5:28 pm; edited 1 time in total |
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fedeliallalinea
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Joined: 08 Mar 2003
Posts: 25176
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| Posted: Sun Oct 21, 2018 4:15 pm Post subject: |
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Try with MAKEOPTS -j1 or add a temporary swap space file
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hanj
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