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pablo_supertux
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Joined: 25 Jan 2004
Posts: 2931
Location: Somewhere between reality and Middle-Earth and in Freiburg (Germany)
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 Posted: Wed Nov 15, 2017 7:36 pm Post subject: zlib and other dependency fails when doing an update |
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Hi
It's been over 5 weeks since my last eix-sync and once again I'm having trouble doing an uvDN world update.
| Code: |
emerge: there are no ebuilds to satisfy ">=sys-libs/zlib-1.2.8-r1:0/0=[abi_x86_32(-),abi_x86_64(-)]".
(dependency required by "media-libs/libpng-1.6.29::gentoo" [installed])
(dependency required by "media-gfx/feh-2.18.3::gentoo" [installed])
(dependency required by "@selected" [set])
(dependency required by "@world" [argument])
emerge: there are no ebuilds to satisfy ">=sys-libs/zlib-1.2.8-r1:0/0=[abi_x86_32(-),abi_x86_64(-)]".
(dependency required by "dev-libs/libxml2-2.9.4-r3::gentoo" [installed])
(dependency required by "net-libs/libsoup-2.56.1::gentoo" [installed])
(dependency required by "net-libs/webkit-gtk-2.4.11-r1::gentoo" [installed])
(dependency required by "@selected" [set])
(dependency required by "@world" [argument])
emerge: there are no ebuilds to satisfy ">=sys-libs/zlib-1.1.3:0/0=".
(dependency required by "dev-lang/python-3.4.5::gentoo" [installed])
(dependency required by "media-libs/libepoxy-1.4.2::gentoo" [installed])
(dependency required by "kde-frameworks/kdeclarative-5.37.0::gentoo" [ebuild])
(dependency required by "kde-frameworks/kcmutils-5.37.0::gentoo" [ebuild])
(dependency required by "kde-plasma/kde-cli-tools-5.10.5::gentoo" [ebuild])
(dependency required by "kde-apps/khelpcenter-17.04.3::gentoo" [installed])
(dependency required by "kde-frameworks/kdelibs-4.14.37::gentoo[handbook]" [ebuild])
(dependency required by "kde-apps/kdebase-kioslaves-16.04.3-r2::gentoo" [installed])
(dependency required by "media-sound/amarok-2.8.90-r3::gentoo" [installed])
(dependency required by "@selected" [set])
(dependency required by "@world" [argument])
emerge: there are no ebuilds to satisfy ">=sys-libs/zlib-1.2.7:0/0=".
(dependency required by "app-text/ghostscript-gpl-9.21::gentoo" [installed])
(dependency required by "net-print/cups-filters-1.16.4::gentoo[postscript]" [ebuild])
(dependency required by "net-print/cups-2.1.4::gentoo" [installed])
(dependency required by "net-wireless/bluez-5.47-r1::gentoo[cups]" [ebuild])
(dependency required by "app-emulation/qemu-2.10.1::gentoo[-static,bluetooth]" [ebuild])
(dependency required by "@selected" [set])
(dependency required by "@world" [argument])
emerge: there are no ebuilds to satisfy ">=sys-libs/zlib-1.2.8-r1:0/0=[abi_x86_32(-),abi_x86_64(-)]".
(dependency required by "media-libs/lcms-2.8-r1::gentoo" [installed])
(dependency required by "app-text/ghostscript-gpl-9.21::gentoo" [installed])
(dependency required by "net-print/cups-filters-1.16.4::gentoo[postscript]" [ebuild])
(dependency required by "net-print/cups-2.1.4::gentoo" [installed])
(dependency required by "net-wireless/bluez-5.47-r1::gentoo[cups]" [ebuild])
(dependency required by "app-emulation/qemu-2.10.1::gentoo[-static,bluetooth]" [ebuild])
(dependency required by "@selected" [set])
(dependency required by "@world" [argument])
emerge: there are no ebuilds to satisfy ">=sys-libs/zlib-1.2.8-r1:0/0=[abi_x86_32(-),abi_x86_64(-)]".
(dependency required by "media-libs/tiff-4.0.8::gentoo" [installed])
(dependency required by "media-libs/imlib2-1.4.9::gentoo[tiff]" [installed])
(dependency required by "x11-wm/fluxbox-1.3.7-r3::gentoo[imlib]" [installed])
(dependency required by "@selected" [set])
(dependency required by "@world" [argument])
emerge: there are no ebuilds to satisfy "sys-libs/zlib:0/0=".
(dependency required by "dev-python/pillow-3.4.2-r1::gentoo" [installed])
(dependency required by "virtual/python-imaging-2::gentoo" [installed])
(dependency required by "@selected" [set])
(dependency required by "@world" [argument])
emerge: there are no ebuilds to satisfy "sys-libs/zlib:0/0=".
(dependency required by "sys-devel/llvm-3.9.1-r1::gentoo" [installed])
(dependency required by "media-libs/mesa-17.0.6::gentoo[-opencl,llvm]" [installed])
(dependency required by "app-emulation/qemu-2.10.1::gentoo[-static,opengl]" [ebuild])
(dependency required by "@selected" [set])
(dependency required by "@world" [argument])
emerge: there are no ebuilds to satisfy ">=sys-libs/zlib-1.2.3:0/0=".
(dependency required by "net-misc/openssh-7.5_p1-r1::gentoo" [installed])
(dependency required by "virtual/ssh-0::gentoo[-minimal]" [installed])
(dependency required by "@system" [set])
(dependency required by "@world" [argument])
emerge: there are no ebuilds to satisfy ">=sys-libs/zlib-1.2.8-r1:0/0=[abi_x86_32(-),abi_x86_64(-)]".
(dependency required by "x11-libs/libpciaccess-0.13.4::gentoo" [installed])
(dependency required by "sys-apps/hwloc-1.11.2-r1::gentoo[pci]" [installed])
(dependency required by "sys-cluster/openmpi-2.0.2::gentoo" [installed])
(dependency required by "virtual/mpi-2.0-r4::gentoo" [installed])
(dependency required by "sci-libs/scalapack-2.0.2::gentoo" [installed])
(dependency required by "@selected" [set])
(dependency required by "@world" [argument])
emerge: there are no ebuilds to satisfy "sys-libs/zlib:0/0=".
(dependency required by "media-gfx/imagemagick-6.9.9.0::gentoo" [installed])
(dependency required by "media-gfx/uniconvertor-2.0_pre379-r1::gentoo" [installed])
(dependency required by "@selected" [set])
(dependency required by "@world" [argument])
emerge: there are no ebuilds to satisfy "sys-libs/zlib:0/0=".
(dependency required by "sci-libs/hdf5-1.8.18::gentoo" [installed])
(dependency required by "@selected" [set])
(dependency required by "@world" [argument])
emerge: there are no ebuilds to satisfy "sys-libs/zlib:0/0=[abi_x86_32(-),abi_x86_64(-)]".
(dependency required by "net-libs/neon-0.30.2::gentoo" [installed])
(dependency required by "app-office/libreoffice-5.4.2.2::gentoo" [ebuild])
(dependency required by "@selected" [set])
(dependency required by "@world" [argument])
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I've already tried "--backtrack=300 --with-bdeps=y" and even higher backtrack numbers, the errors are the same.
My zlib is already at =sys-libs/zlib-1.2.11-r1 (eix shows 1.2.11(0/1) 1.2.11-r1(0/1) as available versions)
what should I do to fix these problems?
Thanks
--------
my emerge --info
| Code: |
Portage 2.3.6 (python 2.7.12-final-0, default/linux/amd64/13.0/desktop, gcc-4.9.4, glibc-2.23-r4, 4.9.16-gentoo x86_64)
=================================================================
System uname: Linux-4.9.16-gentoo-x86_64-Intel-R-_Core-TM-_i7-3770K_CPU_@_3.50GHz-with-gentoo-2.3
KiB Mem: 16308628 total, 11413980 free
KiB Swap: 33554428 total, 33554428 free
Timestamp of repository gentoo: Wed, 15 Nov 2017 19:00:01 +0000
sh bash 4.3_p48-r1
ld GNU ld (Gentoo 2.25.1 p1.1) 2.25.1
app-shells/bash: 4.3_p48-r1::gentoo
dev-java/java-config: 2.2.0-r3::gentoo
dev-lang/perl: 5.24.1-r2::gentoo
dev-lang/python: 2.7.12::gentoo, 3.4.5::gentoo
dev-util/cmake: 3.7.2::gentoo
dev-util/pkgconfig: 0.28-r2::gentoo
sys-apps/baselayout: 2.3::gentoo
sys-apps/openrc: 0.28::gentoo
sys-apps/sandbox: 2.10-r3::gentoo
sys-devel/autoconf: 2.13::gentoo, 2.69::gentoo
sys-devel/automake: 1.11.6-r1::gentoo, 1.13.4::gentoo, 1.14.1::gentoo, 1.15-r2::gentoo
sys-devel/binutils: 2.25.1-r1::gentoo, 2.26.1::gentoo, 2.28-r2::gentoo, 2.28.1::gentoo
sys-devel/gcc: 4.9.4::gentoo, 5.4.0-r3::gentoo
sys-devel/gcc-config: 1.7.3::gentoo
sys-devel/libtool: 2.4.6-r3::gentoo
sys-devel/make: 4.2.1::gentoo
sys-kernel/linux-headers: 4.4::gentoo (virtual/os-headers)
sys-libs/glibc: 2.23-r4::gentoo
Repositories:
gentoo
location: /usr/portage
sync-type: rsync
sync-uri: rsync://rsync.gentoo.org/gentoo-portage
priority: -1000
local
location: /usr/local/portage
masters: gentoo
ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="* -@EULA @EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt /var/bind"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles keepwork merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms splitdebug strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://ftp-stud.fht-esslingen.de/pub/Mirrors/gentoo/"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j9"
PKGDIR="/export/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="X a52 aac acl acpi alsa amd64 bash-completion berkdb bluetooth branding bzip2 cairo cdda cdr cjk cli consolekit cracklib crypt cups cxx dbus directfb dri dts dvd dvdr emboss encode exif fam firefox flac fortran gdbm gif glamor gpm gtk iconv ipv6 jpeg lcms ldap libnotify mad mmx mng modules mp3 mp4 mpeg multilib ncurses nls nptl ogg opengl openmp pam pango pcre pdf png policykit ppds qt3support qt4 readline sdl seccomp session spell sqlite ssl startup-notification svg tcpd theora tiff truetype udev udisks unicode upower usb vim-pager vim-syntax vorbis win32codecs wxwidgets x264 xattr xcb xml xv xvid zlib" ABI_X86="64 32" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" L10N="en en_GB ja" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en en_GB ja" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-6" POSTGRES_TARGETS="postgres9_5" PYTHON_SINGLE_TARGET="python3_4" PYTHON_TARGETS="python2_7 python3_4" RUBY_TARGETS="ruby18 ruby19" USERLAND="GNU" VIDEO_CARDS="nvidia vesa fbdev nv" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset: CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
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Marlo
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Joined: 26 Jul 2003
Posts: 1591
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| Posted: Thu Nov 16, 2017 12:34 am Post subject: |
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Looks like the cache is corrupt. This might help to rebuild the cache.
Grüße
Ma
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Hu
Moderator
Joined: 06 Mar 2007
Posts: 21633
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| Posted: Thu Nov 16, 2017 3:14 am Post subject: |
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| Marlo wrote: | | Looks like the cache is corrupt. This might help to rebuild the cache. |
Why do you think this is cache corruption? The output provided looks like the standard fallout from the ill-considered zlib subslot change. If so, the fix is to rebuild the packages that depend on the old zlib subslot, or to cheat by changing the Portage database to claim that such a rebuild was done, since in this case no subslot change was necessary because the new zlib uses the same soname as the old one. |
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Josef.95
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Joined: 03 Sep 2007
Posts: 4554
Location: Germany
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Marlo
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Joined: 26 Jul 2003
Posts: 1591
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| Posted: Thu Nov 16, 2017 3:16 pm Post subject: |
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| Hu wrote: | | Why do you think this is cache corruption? The output provided looks like the standard fallout from the ill-considered zlib subslot change. |
In my eyes, it looked like eix was looking for a file that was not in its database. From the slot change zlib I did not notice. But I think an emaint sync can never hurt, even if it's not suitable for this zlib problem.
Hu! Please can you specifically say, how pablo_supertux gets his system clean again?
best regards
Ma
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pablo_supertux
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Joined: 25 Jan 2004
Posts: 2931
Location: Somewhere between reality and Middle-Earth and in Freiburg (Germany)
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| Posted: Thu Nov 16, 2017 7:40 pm Post subject: |
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Thanks you for your answers.
| Quote: |
And please make first a sys-apps/portage update to current latest stable (2.3.13-r1)-version.
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This seems to have fixed my problems. Yesterday after 2 hours I made again an rsync (could have been some error in my zlib ebuild) and then I saw a message that a newer version of portage was available. So I updated portage and after that the error were gone.
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A! Elbereth Gilthoniel!
silivren penna míriel
o menel aglar elenath,
Gilthoniel, A! Elbereth! |
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Hu
Moderator
Joined: 06 Mar 2007
Posts: 21633
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| Posted: Fri Nov 17, 2017 2:37 am Post subject: |
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| Marlo wrote: | | In my eyes, it looked like eix was looking for a file that was not in its database. |
There are no messages from eix in OP's post. He ran an eix command, which ran emerge, and emerge printed the error messages.
| Marlo wrote: | | But I think an emaint sync can never hurt, even if it's not suitable for this zlib problem. |
It may not hurt, but it won't help. Worse, threads with a non-zero number of replies are not considered "unanswered", so the first response to a thread needs to be important: either a request for information that is likely to be necessary for solving the problem or, if possible, a solution in its own right.
| Marlo wrote: | | Hu! Please can you specifically say, how pablo_supertux gets his system clean again? |
As I said above, rebuild the packages that depend on zlib. Cheating works in this case, but it's bad practice and can make things worse if done improperly. |
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Ant P.
Watchman
Joined: 18 Apr 2009
Posts: 6920
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| Posted: Tue Nov 21, 2017 9:37 pm Post subject: |
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I absolutely recommend cheating in this case, the zlib subslot thing was a mistake that never should have entered the tree in the first place and the person responsible ought to be stripped of their commit privileges and publically flogged. If you go ahead and rebuild everything blindly, you've just burned a hundred CPU-hours for absolutely nothing.
See here for the quick fix, and don't forget to let the PR author know what you think: https://github.com/gentoo/gentoo/pull/5635#issuecomment-331686155 |
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