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disi
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PostPosted: Wed Jan 04, 2012 10:00 pm    Post subject: Reply with quote

Ant P. wrote:
The ones in ::gentoo are licence- and multilib-masked. The latter is an error; the binaries are static so userspace doesn't matter at all, and I used them fine without multilib. I remember reporting that as a bug months ago... It should work fine on x86-32 too.


How do I run that on a x86-32 system?
Code:
disi foldingathome # file /var/tmp/portage/sci-biology/foldingathome-6.34-r2/work/fah6
/var/tmp/portage/sci-biology/foldingathome-6.34-r2/work/fah6: ELF 64-bit LSB executable, x86-64, version 1 (SYSV), dynamically linked (uses shared libs), for GNU/Linux 2.6.9, stripped


It is the correct version for my system, but there is no ebuild anymore :(
http://folding.stanford.edu/English/Download
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PostPosted: Wed Jan 04, 2012 11:34 pm    Post subject: Reply with quote

From that page it sounds like they dropped 32bit after 6.02. You're better off keeping that old version, it should continue to work at least until they make a new 32bit release. I think all the newer one added is the bigadv SMP2 WUs (which need 64bit and tons of cores to finish within the deadline).
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dalek
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PostPosted: Wed Jan 04, 2012 11:44 pm    Post subject: Reply with quote

Ant P. wrote:
From that page it sounds like they dropped 32bit after 6.02. You're better off keeping that old version, it should continue to work at least until they make a new 32bit release. I think all the newer one added is the bigadv SMP2 WUs (which need 64bit and tons of cores to finish within the deadline).


I still have a older x86 machine and I had to download the 32 bit executables manually. The script finstall kept getting the newer version which is 64 bit. You can use the file command to find out if it is 32 or 64 bit tho.

Code:
root@smoker / # file /root/foldingathome/fah6
/root/foldingathome/fah6: ELF 32-bit LSB executable, Intel 80386, version 1 (SYSV), dynamically linked (uses shared libs), for GNU/Linux 2.0.0, stripped
root@smoker / #


On my main rig which is amd64:

Code:
root@fireball / # file /root/foldingathome/fah6
/root/foldingathome/fah6: ELF 64-bit LSB executable, x86-64, version 1 (SYSV), statically linked, for GNU/Linux 2.6.9, stripped
root@fireball / #


Hope that helps.

:D :D

P. S. I left folding running while I went grocery shopping. I was gone for most of the day. It still can't download a unit. But, emerge -e world is almost done. :roll:
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nomilieu
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PostPosted: Thu Jan 05, 2012 7:38 pm    Post subject: Reply with quote

dalek: Any chance you've changed locations since last folding?
I can fold absolutely everywhere except at my dad's house, with the same computer and settings that work elsewhere, and I decided it had to do with his crappy router (which has, for example, no ipv6 support among other issues that I had to work around).

I ask because I got the same output you did.
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dalek
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PostPosted: Fri Jan 06, 2012 12:40 am    Post subject: Reply with quote

nomilieu wrote:
dalek: Any chance you've changed locations since last folding?
I can fold absolutely everywhere except at my dad's house, with the same computer and settings that work elsewhere, and I decided it had to do with his crappy router (which has, for example, no ipv6 support among other issues that I had to work around).

I ask because I got the same output you did.


I'm still in the same place. Been here most of my life actually. My parents bought it when I was a kid and I'm still here.

Funny thing is, my older x86 box is folding away. It got a unit first try and hasn't stopped since. It's been going at least a month or so. My amd64 box, nothing. Everything goes through the same router and modem too.

Weird huh?

:D :D
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nomilieu
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PostPosted: Fri Jan 06, 2012 1:43 pm    Post subject: Reply with quote

dalek wrote:
Weird huh?

Sounds like it. It's quite annoying to have a bunch of spare computing power you can't use!
Here's to hoping you straighten it out.
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Lomendil
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PostPosted: Tue Feb 21, 2012 8:10 pm    Post subject: Reply with quote

So I was building a little 80 node computing cluster and tried out ubuntu server for the nodes. That was a big mistake. I'm talking random kernel panics, oddly high CPU usage, and an inability to do ACPI reboots. It's amazing what they do to such a stable OS.

I replaced with Gentoo and now it's running beautifully. Thought I'd test out the cluster and show gratitude with some folding. Posting here to bump for awareness; the GLUE team seems like it can be in pretty good shape, why not spare a few cycles, fellow users?
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PostPosted: Sun Feb 23, 2014 8:39 am    Post subject: Reply with quote

Perhaps a bit late to the party. Only 31 active folders left on the gentoo team. Where did everybody go?
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dalek
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PostPosted: Sun Feb 23, 2014 11:11 am    Post subject: Reply with quote

Garumental wrote:
Perhaps a bit late to the party. Only 31 active folders left on the gentoo team. Where did everybody go?


Mine got to the point where it never had anything to do so I just stopped the service and never restarted it. It went for months doing nothing but trying to find work. :?

:D :D
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PostPosted: Fri Feb 28, 2014 11:10 am    Post subject: Reply with quote

While crunching, my energy costs have been four times greater than normal. Due to the german energy costs, this was too much.

And imho the credit assignment is intransparent. In some projects you can earn more credits than in other projects (even if both are GPU projects or both are CPU projects). So if you want to get a high credit rank, you have to support projects which give you many credits, even if you think that other projects are more useful.
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PostPosted: Fri Mar 10, 2017 6:50 pm    Post subject: Reply with quote

Things are quite in this topic, Gentoo team lost 2 positions the last 10 days, come on, start folding! :D
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dalek
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PostPosted: Sat Mar 11, 2017 7:35 am    Post subject: Reply with quote

It's summer time now. To hot for that.
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PostPosted: Mon Mar 16, 2020 12:38 am    Post subject: Reply with quote

Hi,

I was folding many year ago on a Q6600. The Linux version is stuck with a command line, my old setup is gone for good and wondered if it's a good idea to get folding again?

Tried foldingathome ran manually this Friday. And to the last post I'll need the heat at this time of the year so no energy is a-wastin.

I have an Intel 8700, 64Gb RAM and the Asus RTX 2070 to get me off to a good start. I ran this line for a day so it didn't run so hot:

/opt/foldingathome/FAHClient --gpu=true --gpu-usage=80

Is it possible to set it up further with a web browser to see how I'm doing so far?

Regards,

Roger.
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Ant P.
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PostPosted: Mon Mar 16, 2020 1:46 am    Post subject: Reply with quote

The web status page listens by default on http://localhost:7396/. It's already there unless you turn it off.
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PostPosted: Mon Mar 16, 2020 1:33 pm    Post subject: Reply with quote

Got it, thanks. I don't know why I saw port 36330 on their pages.

I had it running for two days and now the web page says CPU: 0% GPU:0% - I've tried the four methods there but no Covid on the page so it must be outdated.

Thanks anyway. Guess I could put this to bed then.

Regards.
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PostPosted: Mon Mar 16, 2020 1:44 pm    Post subject: Reply with quote

I've been folding too. It helps to repair the broken systemd service file (-v start/restart/stop doesn't work on my client). also add foldingathome to video group to get access to the videocard. other than that ... smooth sailing. I actually did 2 covid sets.
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PostPosted: Mon Mar 16, 2020 4:40 pm    Post subject: Reply with quote

I've had the FAHClient running the GPU at 71C for almost two days. I took a break and when I got back to start folding with the settings I've posted - 80% on the GPU to make it run cooler - this happened:

Code:
3:54:57:WU02:FS00:Starting
13:54:57:WARNING:WU02:FS00:AS lowered CPUs from 11 to 10
13:54:57:WU02:FS00:Removing old file './work/02/logfile_01-20200314-113830.txt'
13:54:57:WU02:FS00:Running FahCore: /opt/foldingathome/FAHCoreWrapper /home/rogera2/cores/cores.foldingathome.org/v7/lin/64bit/avx/Core_a7.fah/FahCore_a7 -dir 02 -suffix 01 -version 705 -lifeline 7264 -checkpoint 15 -np 10
13:54:57:WU02:FS00:Started FahCore on PID 7916
13:54:57:WU02:FS00:Core PID:7920
13:54:57:WU02:FS00:FahCore 0xa7 started
13:54:57:WU02:FS00:0xa7:*********************** Log Started 2020-03-16T13:54:57Z ***********************
13:54:57:WU02:FS00:0xa7:************************** Gromacs Folding@home Core ***************************
13:54:57:WU02:FS00:0xa7:       Type: 0xa7
13:54:57:WU02:FS00:0xa7:       Core: Gromacs
13:54:57:WU02:FS00:0xa7:       Args: -dir 02 -suffix 01 -version 705 -lifeline 7916 -checkpoint 15 -np
13:54:57:WU02:FS00:0xa7:             10
13:54:57:WU02:FS00:0xa7:************************************ CBang *************************************
13:54:57:WU02:FS00:0xa7:       Date: Nov 5 2019
13:54:57:WU02:FS00:0xa7:       Time: 06:06:57
13:54:57:WU02:FS00:0xa7:   Revision: 46c96f1aa8419571d83f3e63f9c99a0d602f6da9
13:54:57:WU02:FS00:0xa7:     Branch: master
13:54:57:WU02:FS00:0xa7:   Compiler: GNU 8.3.0
13:54:57:WU02:FS00:0xa7:    Options: -std=c++11 -O3 -funroll-loops -fno-pie -fPIC
13:54:57:WU02:FS00:0xa7:   Platform: linux2 4.19.0-5-amd64
13:54:57:WU02:FS00:0xa7:       Bits: 64
13:54:57:WU02:FS00:0xa7:       Mode: Release
13:54:57:WU02:FS00:0xa7:************************************ System ************************************
13:54:57:WU02:FS00:0xa7:        CPU: Intel(R) Core(TM) i7-8700 CPU @ 3.20GHz
13:54:57:WU02:FS00:0xa7:     CPU ID: GenuineIntel Family 6 Model 158 Stepping 10
13:54:57:WU02:FS00:0xa7:       CPUs: 12
13:54:57:WU02:FS00:0xa7:     Memory: 62.84GiB
13:54:57:WU02:FS00:0xa7:Free Memory: 61.22GiB
13:54:57:WU02:FS00:0xa7:    Threads: POSIX_THREADS
13:54:57:WU02:FS00:0xa7: OS Version: 4.19
13:54:57:WU02:FS00:0xa7:Has Battery: false
13:54:57:WU02:FS00:0xa7: On Battery: false
13:54:57:WU02:FS00:0xa7: UTC Offset: 1
13:54:57:WU02:FS00:0xa7:        PID: 7920
13:54:57:WU02:FS00:0xa7:        CWD: /home/rogera2/work
13:54:57:WU02:FS00:0xa7:******************************** Build - libFAH ********************************
13:54:57:WU02:FS00:0xa7:    Version: 0.0.18
13:54:57:WU02:FS00:0xa7:     Author: Joseph Coffland <joseph@cauldrondevelopment.com>
13:54:57:WU02:FS00:0xa7:  Copyright: 2019 foldingathome.org
13:54:57:WU02:FS00:0xa7:   Homepage: https://foldingathome.org/
13:54:57:WU02:FS00:0xa7:       Date: Nov 5 2019
13:54:57:WU02:FS00:0xa7:       Time: 06:13:26
13:54:57:WU02:FS00:0xa7:   Revision: 490c9aa2957b725af319379424d5c5cb36efb656
13:54:57:WU02:FS00:0xa7:     Branch: master
13:54:57:WU02:FS00:0xa7:   Compiler: GNU 8.3.0
13:54:57:WU02:FS00:0xa7:    Options: -std=c++11 -O3 -funroll-loops -fno-pie
13:54:57:WU02:FS00:0xa7:   Platform: linux2 4.19.0-5-amd64
13:54:57:WU02:FS00:0xa7:       Bits: 64
13:54:57:WU02:FS00:0xa7:       Mode: Release
13:54:57:WU02:FS00:0xa7:************************************ Build *************************************
13:54:57:WU02:FS00:0xa7:       SIMD: avx_256
13:54:57:WU02:FS00:0xa7:********************************************************************************
13:54:57:WU02:FS00:0xa7:Project: 14523 (Run 863, Clone 1, Gen 0)
13:54:57:WU02:FS00:0xa7:Unit: 0x0000000180fccb0a5e459bc61df30ee5
13:54:57:WU02:FS00:0xa7:Reading tar file core.xml
13:54:57:WU02:FS00:0xa7:Reading tar file frame0.tpr
13:54:57:WU02:FS00:0xa7:Digital signatures verified
13:54:57:WU02:FS00:0xa7:Calling: mdrun -s frame0.tpr -o frame0.trr -x frame0.xtc -cpt 15 -nt 10
13:54:57:WU02:FS00:0xa7:Steps: first=0 total=250000
13:54:57:WU02:FS00:0xa7:ERROR:
13:54:57:WU02:FS00:0xa7:ERROR:-------------------------------------------------------
13:54:57:WU02:FS00:0xa7:ERROR:Program GROMACS, VERSION 5.0.4-20191026-456f0d636-unknown
13:54:57:WU02:FS00:0xa7:ERROR:Source code file: /host/debian-stable-64bit-core-a7-avx-release/gromacs-core/build/gromacs/src/gromacs/mdlib/domdec.c, line: 6902
13:54:57:WU02:FS00:0xa7:ERROR:
13:54:57:WU02:FS00:0xa7:ERROR:Fatal error:
13:54:57:WU02:FS00:0xa7:ERROR:There is no domain decomposition for 10 ranks that is compatible with the given box and a minimum cell size of 1.4227 nm
13:54:57:WU02:FS00:0xa7:ERROR:Change the number of ranks or mdrun option -rcon or -dds or your LINCS settings
13:54:57:WU02:FS00:0xa7:ERROR:Look in the log file for details on the domain decomposition
13:54:57:WU02:FS00:0xa7:ERROR:For more information and tips for troubleshooting, please check the GROMACS
13:54:57:WU02:FS00:0xa7:ERROR:website at http://www.gromacs.org/Documentation/Errors
13:54:57:WU02:FS00:0xa7:ERROR:-------------------------------------------------------
13:55:02:WU02:FS00:0xa7:WARNING:Unexpected exit() call
13:55:02:WU02:FS00:0xa7:WARNING:Unexpected exit from science code
13:55:02:WU02:FS00:0xa7:Saving result file ../logfile_01.txt
13:55:02:WU02:FS00:0xa7:Saving result file md.log
13:55:02:WU02:FS00:0xa7:Saving result file science.log
13:55:02:WU02:FS00:FahCore returned: INTERRUPTED (102 = 0x66)
^C13:55:44:Caught signal SIGINT(2) on PID 7264
13:55:44:Exiting, please wait. . .
13:55:46:FS01:Shutting core down
13:55:46:Clean exit


I don't know how to read the message.. I know English but this is anything but.

The help page in the link says it doesn't like that I have so many cores. I was briefly on a Covid project on Friday, at the "--gpu-usage=80" I've got the temp down to 52C, and the Fractal R6 tower was silent too.

I have the Vulkan loader working with the demo files and also CUDA working with Blender, darktable etc, and I've remembered to add to the video group.
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Ant P.
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PostPosted: Mon Mar 16, 2020 5:23 pm    Post subject: Reply with quote

This here is the problem:
Code:
13:54:57:WARNING:WU02:FS00:AS lowered CPUs from 11 to 10

Gromacs does not like thread counts with large prime factors. The wrapper process tries to avoid using 11, but it turns out it doesn't like 2×5 either and gives up.

Easy workaround is to split the CPU into two slots with 8+4 or 9+3 cores.
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PostPosted: Mon Mar 16, 2020 6:24 pm    Post subject: Reply with quote

Thanks, I think I've read that somewhere.. I've managed to:

Code:
 <!-- Folding Slots -->
  <slot id='0' type='CPU'>
  <cpus v='8'/>
  </slot>
  <slot id='1' type='CPU'>
  <cpus v='4'/>
  </slot>
  <slot id='2' type='GPU'/>
</config>


Should this work?

EDIT: I'm back. It's just the CPU slots that's running but they are Covid-19 FWIW.
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PostPosted: Tue Mar 24, 2020 12:09 am    Post subject: Reply with quote

Has anyone managed to get the GPU working. Just my CPU is working.
Quote:
00:01:00:WU01:FS01:Requesting new work unit for slot 01: READY gpu:0:GP106 [GeForce GTX 1060 3GB] 3935 from 128.252.203.10
00:01:00:WU01:FS01:Connecting to 128.252.203.10:8080
00:01:24:WU01:FS01:Downloading 50.74MiB
00:01:30:WU01:FS01:Download 65.78%
00:01:32:WU01:FS01:Download complete
00:01:32:WU01:FS01:Received Unit: id:01 state:DOWNLOAD error:NO_ERROR project:11762 run:0 clone:4743 gen:9 core:0x22 unit:0x0000001180fccb0a5e6d81163791b5d0
00:01:32:WU01:FS01:Starting
00:01:32:ERROR:WU01:FS01:Failed to start core: OpenCL device matching slot 1 not found, try setting 'opencl-index' manually


Been reading other forums which isn't that much help. But emerged virtual/opencl-2, ocl-icd and remerged the nvidia-drivers, which made it at least get to the above. But have no idea on getting it to work on GPU still.
Can't find anything on google as to where to set 'opencl-index' manually.
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PostPosted: Tue Mar 24, 2020 3:45 am    Post subject: Reply with quote

Did you try adding the "foldingathome" user to video group?
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PostPosted: Tue Mar 24, 2020 5:07 am    Post subject: Reply with quote

Decibels
Put spmething like this in config.xml to set opencl-index manualy

<slot id='0' type='GPU'>
<client-type v='advanced'/>
<gpu-index v='1'/>
<opencl-index v='1'/>
</slot>
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PostPosted: Tue Mar 24, 2020 12:33 pm    Post subject: Reply with quote

axl
Quote:
Did you try adding the "foldingathome" user to video group?

Yes

hariskar
Quote:
Decibels
Put spmething like this in config.xml to set opencl-index manualy

<slot id='0' type='GPU'>
<client-type v='advanced'/>
<gpu-index v='1'/>
<opencl-index v='1'/>
</slot>


The <gpu-index v='1'/> stopped FAH from even starting. Removed that an FAH would start again with CPU only.
Added this <cuda-index v='-1'/> and changed opencl-index to -1. And still no luck.
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PostPosted: Tue Mar 24, 2020 12:40 pm    Post subject: Reply with quote

Maybe try with value 0?
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PostPosted: Tue Mar 24, 2020 1:03 pm    Post subject: Reply with quote

Do you have opencl flag enabled? Could emerge clinfo and try to run that to try to diagnose opencl.
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