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jody
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Joined: 16 Oct 2007
Posts: 460
Location: Switzerland

PostPosted: Wed Aug 21, 2013 2:50 pm    Post subject: [SOLVED] science overlay: sci-libs/atlas fails to build Reply with quote

Hi
(i hope this is the correct forum for my problem)

After adding the science overlay with layman, i went ahead to
emerge sci-lib/atlas
The build keeps going for some time an then an error occurs.

I am using gcc-4.4.7
system information (8 cores) :
Code:
Linux octopus 3.6.11-gentoo #1 SMP Wed Jan 9 18:57:40 CET 2013 x86_64 Intel(R) Xeon(R) CPU E5-1620 0 @ 3.60GHz GenuineIntel GNU/Linux


Here are the last few lines of the build log:
Code:

/usr/bin/gcc -o ATL_dtrsmLUTU.o -c -DL2SIZE=4194304 -I/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS_shared/include -I/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//include -I/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//include/contrib -DAdd_ -DF77_INTEGER=int -DStringSunStyle -DATL_OS_Linux -DATL_ARCH_Corei2 -DATL_CPUMHZ=3601 -DATL_AVX -DATL_SSE3 -DATL_SSE2 -DATL_SSE1 -DATL_USE64BITS -DATL_GAS_x8664 -m64 -DWALL -DATL_NCPU=8 -O2 -pipe -fPIC -m64 -DDREAL -DUpper_ \
         -DTranspose_ -DUnitDiag_ /var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmL.c
/usr/bin/gcc -o ATL_dtrsmRUNN.o -c -DL2SIZE=4194304 -I/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS_shared/include -I/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//include -I/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//include/contrib -DAdd_ -DF77_INTEGER=int -DStringSunStyle -DATL_OS_Linux -DATL_ARCH_Corei2 -DATL_CPUMHZ=3601 -DATL_AVX -DATL_SSE3 -DATL_SSE2 -DATL_SSE1 -DATL_USE64BITS -DATL_GAS_x8664 -m64 -DWALL -DATL_NCPU=8 -O2 -pipe -fPIC -m64 -DDREAL -DUpper_ \
         -DNotranspose_ -DNonUnitDiag_ /var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmR.c
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c: In function 'ATL_rk4':
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:31: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'rB00'
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:31: error: 'rB00' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:31: error: (Each undeclared identifier is reported only once
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:31: error: for each function it appears in.)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:31: error: 'rB01' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:31: error: 'rB02' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:32: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'rB20'
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:32: error: 'rB20' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:32: error: 'rB21' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:32: error: 'rB22' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:33: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'rC00'
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:33: error: 'rC00' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:33: error: 'rC01' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:33: error: 'rC02' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:34: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'rC40'
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:34: error: 'rC40' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:34: error: 'rC41' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:34: error: 'rC42' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:35: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'rA0'
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:35: error: 'rA0' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:35: error: 'rA1' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:53: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'rB'
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:53: error: 'rB' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c: In function 'ATL_rk4':
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:31: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'rB00'
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:31: error: 'rB00' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:31: error: (Each undeclared identifier is reported only once
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:31: error: for each function it appears in.)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:31: error: 'rB01' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:31: error: 'rB02' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:32: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'rB20'
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:32: error: 'rB20' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:32: error: 'rB21' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:32: error: 'rB22' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:142: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'rB'
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:33: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'rC00'
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:33: error: 'rC00' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:33: error: 'rC01' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:33: error: 'rC02' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKL_rk4.c:186: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'rB'
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:34: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'rC40'
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:34: error: 'rC40' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:34: error: 'rC41' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:34: error: 'rC42' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:35: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'rA0'
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:35: error: 'rA0' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:35: error: 'rA1' undeclared (first use in this function)
/usr/bin/gcc -o ATL_dtrsmRUNU.o -c -DL2SIZE=4194304 -I/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS_shared/include -I/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//include -I/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//include/contrib -DAdd_ -DF77_INTEGER=int -DStringSunStyle -DATL_OS_Linux -DATL_ARCH_Corei2 -DATL_CPUMHZ=3601 -DATL_AVX -DATL_SSE3 -DATL_SSE2 -DATL_SSE1 -DATL_USE64BITS -DATL_GAS_x8664 -m64 -DWALL -DATL_NCPU=8 -O2 -pipe -fPIC -m64 -DDREAL -DUpper_ \
         -DNotranspose_ -DUnitDiag_ /var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmR.c
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:53: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'rB'
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:53: error: 'rB' undeclared (first use in this function)
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:142: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'rB'
/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS//src/blas/level3/kernel/ATL_trsmKR_rk4.c:186: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'rB'
make[5]: *** [ATL_dtrsmKL_rk4.o] Error 1
make[5]: *** Waiting for unfinished jobs....
make[5]: *** [ATL_dtrsmKR_rk4.o] Error 1
make[5]: Leaving directory `/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS_shared/src/blas/level3/kernel'
make[4]: *** [dlib] Error 2
make[4]: Leaving directory `/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS_shared/src/blas/level3/kernel'
make[3]: *** [dkern] Error 2
make[3]: Leaving directory `/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS_shared/src/blas/level3'
make[2]: *** [IBuildLibs] Error 2
make[2]: Leaving directory `/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS_shared/bin'
   DONE  STAGE 5-1-0 at 16:20




ATLAS install complete.  Examine
ATLAS/bin/<arch>/INSTALL_LOG/SUMMARY.LOG for details.
make[1]: Leaving directory `/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS_shared'
make clean
make[1]: Entering directory `/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS_shared'
rm -f *.o x* config?.out *core*
make[1]: Leaving directory `/var/tmp/portage/sci-libs/atlas-3.10.1-r1/work/ATLAS_shared'
make -j5 libclapack.a
make: *** No rule to make target `liblapack.a', needed by `libclapack.a'.  Stop.
 * ERROR: sci-libs/atlas-3.10.1-r1 failed (compile phase):
 *   emake failed


output from `emerge --info '=sci-libs/atlas-3.10.1-r1'`
Code:
 # emerge --info '=sci-libs/atlas-3.10.1-r1'
Portage 2.1.12.2 (default/linux/amd64/13.0/desktop/gnome, gcc-4.4.7, glibc-2.15-r3, 3.6.11-gentoo x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-3.6.11-gentoo-x86_64-Intel-R-_Xeon-R-_CPU_E5-1620_0_@_3.60GHz-with-gentoo-2.2
KiB Mem:    65960912 total,  63744576 free
KiB Swap:   50331644 total,  50331644 free
Timestamp of tree: Wed, 21 Aug 2013 13:15:01 +0000
ld GNU ld (GNU Binutils) 2.23.1
app-shells/bash:          4.2_p45
dev-java/java-config:     2.1.12-r1
dev-lang/python:          2.7.5, 3.2.5-r1
dev-util/cmake:           2.8.10.2-r2
dev-util/pkgconfig:       0.28
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.11.8
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.11.6, 1.12.6
sys-devel/binutils:       2.23.1
sys-devel/gcc:            4.1.2, 4.3.6-r1, 4.4.7, 4.5.4, 4.6.3
sys-devel/gcc-config:     1.7.3
sys-devel/libtool:        2.4-r1
sys-devel/make:           3.82-r4
sys-kernel/linux-headers: 3.7 (virtual/os-headers)
sys-libs/glibc:           2.15-r3
Repositories: gentoo zugaina science
ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://mirror.switch.ch/ftp/mirror/gentoo http://gd.tuwien.ac.at/opsys/linux/gentoo/ http://de-mirror.org/distro/gentoo/ http://mirror.switch.ch/mirror/gentoo/"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j5"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/var/lib/layman/zugaina /var/lib/layman/science"
SYNC="rsync://rsync1.ca.gentoo.org/gentoo-portage"
USE="X a52 aac acl acpi alsa amd64 bash-completion berkdb bluetooth branding bzip2 cairo cdda cdparanoia cdr cli colord consolekit cracklib crypt cups cxx dbus dri dts dvd dvdr eds emboss encode evo exif f77 fam fftw firefox flac fortran gdbm gif gnome gnome-keyring gnome-online-accounts gpm gstreamer gtk gtk2 iconv introspection ipv6 jpeg kde lcms ldap libnotify libsecret mad mmx mmxext mng modules mp3 mp4 mpeg mpi mudflap multilib nautilus ncurses nls nptl nsplugin nvidia ogg opengl openmp openssl oss pam pango pcre pdf png policykit ppds pulseaudio python qt3support qt4 quicktime readline real sdl session sid socialweb spell sqlite sse sse-filters sse2 ssl startup-notification svg tcpd tetex theora threads tiff truetype udev udisks unicode upower usb v4l vorbis win32codecs wma wxwidgets x264 xcb xinerama xml xv xvid zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-4" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_2" RUBY_TARGETS="ruby19 ruby18" USERLAND="GNU" VIDEO_CARDS="nvidia" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON



output of `emerge -pqv '=sci-libs/atlas-3.10.1-r1'`
Code:
 # emerge -pqv '=sci-libs/atlas-3.10.1-r1'
[ebuild  N    ] sci-libs/atlas-3.10.1-r1  USE="fortran threads -doc -generic -lapack -static-libs"


I have tried to find any information on this behavior but didn't find anything useful.

Is this build failure a known problem?
Or must i do something previously to building atlas?

Thank You
Jody


Last edited by jody on Thu Aug 22, 2013 7:29 am; edited 1 time in total
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megabaks
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Joined: 22 Jan 2012
Posts: 237
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PostPosted: Wed Aug 21, 2013 4:01 pm    Post subject: Reply with quote

http://mac-os-forge.2317878.n4.nabble.com/MacPorts-38816-atlas-post-build-proc-fails-td215650.html#none
so, try -mno-avx flag
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jody
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Joined: 16 Oct 2007
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Location: Switzerland

PostPosted: Thu Aug 22, 2013 7:28 am    Post subject: Reply with quote

Hi Megabaks

Thank you for leading me in the right direction!

I added '-mno-avx to my CFLAGS:
Code:
CFLAGS="-O2 -pipe -mno-avx"
in make.conf, but unfortunately this didn't help.
I still got the same 'undeclared' errors from the compilation of src/blas/level3/kernel/ATL_trsmKL_rk4.c (see above).
One of the bad lines is
Code:
   register __m256d rB00, rB01, rB02;


However, in the link you posted it says:
Quote:
because __m256d types are only defined when you use the -mavx flag.


So by adding '-mavx' to my CFLAGS i managed to successfully buildcd vm sci-libs/atlas.

Thank You
Jody
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