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indio
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PostPosted: Wed Mar 13, 2013 6:30 am    Post subject: blocks when updating world Reply with quote

It's been a while since I've updated world. Far too long, so of course there are now a ton of packages to rebuild, and a few are conflicting.
Specifically, I've got:
Code:
 
Total: 218 packages (108 upgrades, 47 new, 2 in new slots, 61 reinstalls, 2 uninstalls), Size of downloads: 496,331 kB
Conflict: 5 blocks (1 unsatisfied)

 * Error: The above package list contains packages which cannot be
 * installed at the same time on the same system.

  (sec-policy/selinux-base-2.20120725-r9::gentoo, installed) pulled in by
    >=sec-policy/selinux-base-2.20120725-r9 required by (sec-policy/selinux-base-policy-2.20120725-r9::gentoo, installed)

  (sys-fs/udev-197-r8::gentoo, ebuild scheduled for merge) pulled in by
    >=sys-fs/udev-197-r8[gudev,kmod] required by (virtual/udev-197-r1::gentoo, ebuild scheduled for merge)


I'm not sure how to resolve this, can I have some help? Thanks a ton.
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Dominique_71
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PostPosted: Wed Mar 13, 2013 12:26 pm    Post subject: Reply with quote

This doesn't show the problems. You should past more.
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indio
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PostPosted: Wed Mar 13, 2013 2:00 pm    Post subject: Reply with quote

The only other output I see from emerge is some changing use flags and a list of a couple hundred packages it wants to update. The last package is the only one highlighted in red:

Code:
[blocks B      ] <sec-policy/selinux-base-2.20120725-r10 ("<sec-policy/selinux-base-2.20120725-r10" is blocking sys-fs/udev-197-r8)


I can post the whole output if you'd like, but I'm not seeing anything else relevant.
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Hu
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PostPosted: Wed Mar 13, 2013 10:28 pm    Post subject: Reply with quote

Please provide the output of emerge --info. Based on the limited information shown, it looks to me like Portage is unwilling or unable to upgrade your SELinux policy, and cannot install a new udev until that policy is upgraded.
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indio
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PostPosted: Thu Mar 14, 2013 3:30 am    Post subject: Reply with quote

Got it, thank you. emerge --info yields:
Code:

Portage 2.1.11.52 (default/linux/x86/13.0, gcc-4.5.4, glibc-2.15-r3, 3.5.7-gentoo i686)
=================================================================
System uname: Linux-3.5.7-gentoo-i686-Intel-R-_Atom-TM-_CPU_N2600_@_1.60GHz-with-gentoo-2.1
KiB Mem:     1017184 total,    212344 free
KiB Swap:    8388604 total,   8388604 free
Timestamp of tree: Wed, 13 Mar 2013 05:15:01 +0000
ld GNU ld (GNU Binutils) 2.22
app-shells/bash:          4.2_p37
dev-java/java-config:     2.1.12-r1
dev-lang/python:          2.7.3-r2, 3.2.3
dev-util/cmake:           2.8.9
dev-util/pkgconfig:       0.27.1
sys-apps/baselayout:      2.1-r1
sys-apps/openrc:          0.11.8
sys-apps/sandbox:         2.5
sys-devel/autoconf:       2.13, 2.68
sys-devel/automake:       1.9.6-r3, 1.10.3, 1.11.6
sys-devel/binutils:       2.22-r1
sys-devel/gcc:            4.5.4
sys-devel/gcc-config:     1.7.3
sys-devel/libtool:        2.4-r1
sys-devel/make:           3.82-r3
sys-kernel/linux-headers: 3.6 (virtual/os-headers)
sys-libs/glibc:           2.15-r3
Repositories: gentoo x-portage
ACCEPT_KEYWORDS="x86"
ACCEPT_LICENSE="* -@EULA"
CBUILD="i686-pc-linux-gnu"
CFLAGS="-O2 -march=native -pipe -msse -msse2 -mmmx"
CHOST="i686-pc-linux-gnu"
CONFIG_PROTECT="/etc"
CONFIG_PROTECT_MASK="${EPREFIX}/etc/gconf /etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -march=native -pipe -msse -msse2 -mmmx"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -march=i686 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch"
FFLAGS="-O2 -march=i686 -pipe"
GENTOO_MIRRORS="http://mirror.mcs.anl.gov/pub/gentoo/ rsync://mirror.mcs.anl.gov/gentoo/ ftp://mirror.mcs.anl.gov/pub/gentoo/ http://mirror.datapipe.net/gentoo ftp://mirror.datapipe.net/gentoo http://gentoo.mirrors.easynews.com/linux/gentoo/ http://chi-10g-1-mirror.fastsoft.net/pub/linux/gentoo/gentoo-distfiles/ ftp://chi-10g-1-mirror.fastsoft.net/pub/linux/gentoo/gentoo-distfiles/ http://www.gtlib.gatech.edu/pub/gentoo rsync://rsync.gtlib.gatech.edu/gentoo ftp://ftp.gtlib.gatech.edu/pub/gentoo http://gentoo.mirrors.hoobly.com/ ftp://ftp.ussg.iu.edu/pub/linux/gentoo http://lug.mtu.edu/gentoo/ ftp://lug.mtu.edu/gentoo/ ftp://gentoo.netnitco.net/pub/mirrors/gentoo/source/ http://gentoo.netnitco.net http://gentoo.osuosl.org/ http://gentoo.mirrors.pair.com/ ftp://gentoo.mirrors.pair.com/ rsync://mirrors.rit.edu/gentoo/ ftp://mirrors.rit.edu/gentoo/ http://mirrors.rit.edu/gentoo/ ftp://mirror.iawnet.sandia.gov/pub/gentoo/"
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j3"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/local/portage"
SYNC="rsync://rsync.us.gentoo.org/gentoo-portage"
USE="X aac acl acpi alsa berkdb bindist branding bzip2 cairo cdr cli cracklib crypt cxx dbus dri dts dvd dvdr emboss encode exif fam fbdev firefox flac fortran gdbm gif gpm gtk hal iconv ipv6 joystick jpeg lcms ldap libnotify mad mikmod mng modules mp3 mp4 mpeg mudflap ncurses nls nptl ogg opengl openmp pam pango pcre pdf png ppds qt3support qt4 readline sdl session spell ssl startup-notification svg tcpd tiff truetype unicode usb vorbis x264 x86 xcb xml xv xvid zlib" ABI_X86="32" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="evdev keyboard mouse synaptics" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" PHP_TARGETS="php5-3" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_2" RUBY_TARGETS="ruby18 ruby19" USERLAND="GNU" VIDEO_CARDS="intel" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
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ssuominen
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PostPosted: Thu Mar 14, 2013 8:52 am    Post subject: Reply with quote

Upgrade to at least =sec-policy/selinux-base-2.20120725-r10 because -r9 and olders are blocked by udev.

Code:

# emerge -v1 ">=sec-policy/selinux-base-2.20120725-r10"
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indio
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PostPosted: Thu Mar 14, 2013 2:06 pm    Post subject: Reply with quote

Thanks. Upon running
Code:
sudo emerge -v1 ">=sec-policy/selinux-base-2.20120725-r10"


I get:
Code:
These are the packages that would be merged, in order:

Calculating dependencies... done!
[ebuild  N     ] sys-apps/kmod-12-r1  USE="tools zlib -debug -doc -lzma -static-libs" 1,246 kB
[uninstall     ] sys-apps/module-init-tools-3.16-r2  USE="-static"
[blocks b      ] sys-apps/module-init-tools ("sys-apps/module-init-tools" is blocking sys-apps/kmod-12-r1)
[blocks b      ] sys-apps/kmod ("sys-apps/kmod" is blocking sys-apps/module-init-tools-3.16-r2)
[ebuild     U  ] sys-fs/udev-197-r8 [171-r9] USE="acl%* kmod%* openrc%* -doc% -gudev* -hwdb -introspection -keymap (-selinux) -static-libs% (-action_modeswitch%) (-build%) (-debug%) (-edd%) (-extras%) (-floppy%) (-rule_generator%*) (-test%)" 2,011 kB
[ebuild     U  ] virtual/udev-197-r1 [171] USE="kmod%* -gudev* -hwdb -introspection -keymap (-selinux) -static-libs" 0 kB
[ebuild  N     ] sys-fs/udev-init-scripts-23  5 kB
[ebuild     U #] sec-policy/selinux-base-2.20120725-r12 [2.20120725-r9] USE="open_perms peer_perms ubac unconfined* -doc" 420 kB
[blocks b      ] <sec-policy/selinux-base-2.20120725-r10 ("<sec-policy/selinux-base-2.20120725-r10" is blocking sys-fs/udev-197-r8)
[blocks B      ] <sys-fs/udev-186 ("<sys-fs/udev-186" is blocking sys-fs/udev-init-scripts-23)

Total: 5 packages (3 upgrades, 2 new, 1 uninstall), Size of downloads: 3,680 kB
Conflict: 4 blocks (1 unsatisfied)

!!! Multiple package instances within a single package slot have been pulled
!!! into the dependency graph, resulting in a slot conflict:

virtual/udev:0

  (virtual/udev-171::gentoo, installed) pulled in by
    virtual/udev[gudev] required by (sys-power/upower-0.9.18::gentoo, installed)
    virtual/udev[gudev] required by (gnome-base/gvfs-1.12.3::gentoo, installed)
    ~virtual/udev-171 required by (net-wireless/bluez-4.99::gentoo, installed)

  (virtual/udev-197-r1::gentoo, ebuild scheduled for merge) pulled in by
    >=virtual/udev-197-r1 required by (sys-fs/udev-197-r8::gentoo, ebuild scheduled for merge)
    =virtual/udev-197-r1 required by (sec-policy/selinux-base-2.20120725-r12::gentoo, ebuild scheduled for merge)
    (and 7 more with the same problems)

sys-fs/udev:0

  (sys-fs/udev-171-r9::gentoo, installed) pulled in by
    ~sys-fs/udev-171[gudev?,hwdb?,introspection?,keymap?,selinux?] required by (virtual/udev-171::gentoo, installed)

  (sys-fs/udev-197-r8::gentoo, ebuild scheduled for merge) pulled in by
    >=sys-fs/udev-197-r8[gudev?,hwdb?,introspection?,keymap?,kmod?,selinux?,static-libs?] required by (virtual/udev-197-r1::gentoo, ebuild scheduled for merge)



So it looks like udev is blocking other udev packages now. Do I unmerge sys-fs/udev-init-scripts-23 to make room for sys-fs/udev-186?
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krinn
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PostPosted: Thu Mar 14, 2013 2:46 pm    Post subject: Reply with quote

just goes the --nodeps way, less pain. emerge -1 --nodeps udev selinux-base-2.20120725
Once done with nodeps rerun without it to have all dependencies met.
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indio
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PostPosted: Thu Mar 14, 2013 6:42 pm    Post subject: Reply with quote

Unfortunately
Code:
sudo emerge -1 --nodeps udev
fails:

Code:

checking for KMOD... no
configure: error: *** kmod support requested but libraries not found

!!! Please attach the following file when seeking support:
!!! /var/tmp/portage/sys-fs/udev-197-r8/work/systemd-197/config.log
 * ERROR: sys-fs/udev-197-r8 failed (configure phase):
 *   econf failed
 *
 * Call stack:
 *          ebuild.sh, line   93:  Called src_configure
 *        environment, line 3704:  Called econf 'ac_cv_search_cap_init=' 'ac_cv_header_sys_capability_h=yes' 'DBUS_CFLAGS= ' 'DBUS_LIBS= ' '--bindir=/bin' '--docdir=/usr/share/doc/udev-197-r8' '--libdir=/usr/lib' '--with-html-dir=/usr/share/doc/udev-197-r8/html' '--with-rootprefix=' '--with-rootlibdir=/lib' '--disable-audit' '--disable-coredump' '--disable-hostnamed' '--disable-ima' '--disable-libcryptsetup' '--disable-localed' '--disable-logind' '--disable-myhostname' '--disable-nls' '--disable-pam' '--disable-quotacheck' '--disable-readahead' '--enable-split-usr' '--disable-tcpwrap' '--disable-timedated' '--disable-xz' '--disable-silent-rules' '--enable-acl' '--disable-gtk-doc' '--disable-gudev' '--disable-keymap' '--enable-kmod' '--disable-selinux' '--disable-static'
 *   phase-helpers.sh, line  518:  Called die
 * The specific snippet of code:
 *            die "econf failed"
 *
 * If you need support, post the output of `emerge --info '=sys-fs/udev-197-r8'`,
 * the complete build log and the output of `emerge -pqv '=sys-fs/udev-197-r8'`.
 * The complete build log is located at '/var/tmp/portage/sys-fs/udev-197-r8/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sys-fs/udev-197-r8/temp/environment'.
 * Working directory: '/var/tmp/portage/sys-fs/udev-197-r8/work/systemd-197'
 * S: '/var/tmp/portage/sys-fs/udev-197-r8/work/systemd-197'

>>> Failed to emerge sys-fs/udev-197-r8, Log file:

>>>  '/var/tmp/portage/sys-fs/udev-197-r8/temp/build.log'

 * Messages for package sys-fs/udev-197-r8:

 * ERROR: sys-fs/udev-197-r8 failed (configure phase):
 *   econf failed
 *
 * Call stack:
 *          ebuild.sh, line   93:  Called src_configure
 *        environment, line 3704:  Called econf 'ac_cv_search_cap_init=' 'ac_cv_header_sys_capability_h=yes' 'DBUS_CFLAGS= ' 'DBUS_LIBS= ' '--bindir=/bin' '--docdir=/usr/share/doc/udev-197-r8' '--libdir=/usr/lib' '--with-html-dir=/usr/share/doc/udev-197-r8/html' '--with-rootprefix=' '--with-rootlibdir=/lib' '--disable-audit' '--disable-coredump' '--disable-hostnamed' '--disable-ima' '--disable-libcryptsetup' '--disable-localed' '--disable-logind' '--disable-myhostname' '--disable-nls' '--disable-pam' '--disable-quotacheck' '--disable-readahead' '--enable-split-usr' '--disable-tcpwrap' '--disable-timedated' '--disable-xz' '--disable-silent-rules' '--enable-acl' '--disable-gtk-doc' '--disable-gudev' '--disable-keymap' '--enable-kmod' '--disable-selinux' '--disable-static'
 *   phase-helpers.sh, line  518:  Called die
 * The specific snippet of code:
 *            die "econf failed"
 *
 * If you need support, post the output of `emerge --info '=sys-fs/udev-197-r8'`,
 * the complete build log and the output of `emerge -pqv '=sys-fs/udev-197-r8'`.
 * The complete build log is located at '/var/tmp/portage/sys-fs/udev-197-r8/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sys-fs/udev-197-r8/temp/environment'.
 * Working directory: '/var/tmp/portage/sys-fs/udev-197-r8/work/systemd-197'
 * S: '/var/tmp/portage/sys-fs/udev-197-r8/work/systemd-197'


Wow this system is having trouble. Thank you guys so much!
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BillWho
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PostPosted: Thu Mar 14, 2013 7:05 pm    Post subject: Reply with quote

indio wrote:
Wow this system is having trouble.

What it's complaining about now appears to be sys-apps/kmod. But, that will probably fail too. If i remember correctly It replaced module-init-tools.

One thing that confuses me is you're having these problems with sec-policy/selinux-base , yet I don't see where you have it enabled e.g the selinux profile or selinux use flags :?

Did you have it set and later change it :?:
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indio
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PostPosted: Thu Mar 14, 2013 7:18 pm    Post subject: Reply with quote

No. I don't need this to be a hardened machine, so I never bothered turning on any selinux stuff. I assumed something dragged it in as a dependency, but it is odd that I don't have it turned on in use flags.

Indeed, kmod failed to install. Do I want to uninstall module-init-tools to make room for it?
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BillWho
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PostPosted: Thu Mar 14, 2013 7:26 pm    Post subject: Reply with quote

indio wrote:
No. I don't need this to be a hardened machine, so I never bothered turning on any selinux stuff. I assumed something dragged it in as a dependency, but it is odd that I don't have it turned on in use flags.

Does an emerge --depclean -a list the selinux packages :?: If it does, then unmerging them will help considerably.
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indio
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PostPosted: Thu Mar 14, 2013 7:52 pm    Post subject: Reply with quote

Unfortunately emerge bails out resolving dependencies because updating world isn't finished:

Code:
 * Dependencies could not be completely resolved due to
 * the following required packages not being installed:
 *
 *   virtual/awk pulled in by:
 *     net-analyzer/ntop-4.0.3
 *
 *   sys-apps/busybox[mdev] pulled in by:
 *     virtual/dev-manager-0
 *
 * Have you forgotten to do a complete update prior to depclean? The
 * most comprehensive command for this purpose is as follows:
 *
 *   emerge --update --newuse --deep --with-bdeps=y @world
 *
 * Note that the --with-bdeps=y option is not required in many
 * situations. Refer to the emerge manual page (run `man emerge`)
 * for more information about --with-bdeps.
 *
 * Also, note that it may be necessary to manually uninstall
 * packages that no longer exist in the portage tree, since it may
 * not be possible to satisfy their dependencies.


Awk and busybox are certainly installed, but for some reason the packages are marked as not-installed?
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BillWho
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PostPosted: Thu Mar 14, 2013 8:15 pm    Post subject: Reply with quote

Do they show up in your world with qlist -I |grep "awk\|busybox" :?:

If not emerge --noreplace virtual/awk && emerge --noreplace sys-apps/busybox or just try to emerge them.

To determine what's pulling selinux emerge -pv --depclean sec-policy/selinux-base sec-policy/selinux-base-policy
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indio
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PostPosted: Thu Mar 14, 2013 8:21 pm    Post subject: Reply with quote

Yes, both packages show up with qlist.

Here's what I get when I query what's pulling selinux:
Code:

Calculating dependencies... done!
  sec-policy/selinux-base-2.20120725-r9 pulled in by:
    sec-policy/selinux-base-policy-2.20120725-r9 requires >=sec-policy/selinux-base-2.20120725-r9

  sec-policy/selinux-base-policy-2.20120725-r9 pulled in by:
    sec-policy/selinux-avahi-2.20120725-r9 requires >=sec-policy/selinux-base-policy-2.20120725-r9
    sec-policy/selinux-flash-2.20120725-r9 requires >=sec-policy/selinux-base-policy-2.20120725-r9
    sec-policy/selinux-prelink-2.20120725-r9 requires >=sec-policy/selinux-base-policy-2.20120725-r9

>>> No packages selected for removal by depclean
Packages installed:   852
Packages in world:    165
Packages in system:   42
Required packages:    852
Number to remove:     0
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BillWho
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PostPosted: Thu Mar 14, 2013 8:42 pm    Post subject: Reply with quote

indio,

I would unmerge these
Code:
sec-policy/selinux-avahi-2.20120725-r9
sec-policy/selinux-flash-2.20120725-r9
sec-policy/selinux-prelink-2.20120725-r9

Then emerge --depclean followed by revdep-rebuild -p and return the list from revdep-rebuild

UPDATE: add this to the unmerge list sec-policy/selinux-base-policy-2.20120725-r9
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indio
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PostPosted: Thu Mar 14, 2013 9:22 pm    Post subject: Reply with quote

Alright, unmerged the four selinux packages, but emerge still errors out complaining that awk and busybox aren't installed.
So I went ahead and emerged those two packages, then ran emerge --depclean. Looks like it removed 33 packages or so.

But at least something around here seems happy. Here's what I got from revdep-rebuild:
Code:
 * Dynamic linking on your system is consistent... All done.
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PostPosted: Thu Mar 14, 2013 9:32 pm    Post subject: Reply with quote

indio,

revdep returning your system is consistent is a good sign - it didn't find any broken dependencies so things are getting cleaned up :D

Now try to emerge sys-apps/kmod. It might conflict with sys-apps/module-init-tools. If that's the case you can unmerge sys-apps/module-init-tools
_________________
Good luck :wink:

Since installing gentoo, my life has become one long emerge :)
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indio
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Joined: 13 Mar 2013
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PostPosted: Fri Mar 15, 2013 3:23 am    Post subject: Reply with quote

Kmod installed perfectly, when I go back to updating world it says there are only two blocked packages now, and neither are marked 'unsatisfied'.
Thanks for the help everyone! I'll start the main update process this weekend, I'll probably need the laptop tomorrow.
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