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tenspd137
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PostPosted: Sat Feb 16, 2013 6:59 am    Post subject: Initramfs to mount seperate /usr - fsck fails[solved] Reply with quote

Hi all,

I have /usr on a software raid volume (raid-1) and am using the instructions found:

http://wiki.gentoo.org/wiki/Early_Userspace_Mounting

to make an initramfs image. Since it is on raid and on a 64 bit system, I made the following changes to the initramfs_list:

Code:

# directory structure
dir /proc       755 0 0
dir /usr        755 0 0
dir /bin        755 0 0
dir /sys        755 0 0
dir /var        755 0 0
dir /lib64      755 0 0
dir /sbin       755 0 0
dir /mnt        755 0 0
dir /mnt/root   755 0 0
dir /etc        755 0 0
dir /root       700 0 0
dir /dev        755 0 0


# busybox
file /bin/busybox /bin/busybox 755 0 0

# libraries required by /sbin/fsck.ext4 and /sbin/fsck
file    /lib64/ld-linux-86-64.so.2 /lib64/ld-linux-x86-64.so.2           755 0 0
file    /lib64/libext2fs.so.2      /lib64/libext2fs.so.2                 755 0 0
file    /lib64/libcom_err.so.2     /lib64/libcom_err.so.2                755 0 0
file    /lib64/libpthread.so.0     /lib64/libpthread.so.0                755 0 0
file    /lib64/libblkid.so.1       /lib64/libblkid.so.1                  755 0 0
file    /lib64/libuuid.so.1        /lib64/libuuid.so.1                   755 0 0
file    /lib64/libe2p.so.2         /lib64/libe2p.so.2                    755 0 0
file    /lib64/libc.so.6           /lib64/libc.so.6                      755 0 0

file    /sbin/fsck               /sbin/fsck                          755 0 0
file    /sbin/fsck.ext4          /sbin/fsck.ext4                     755 0 0
file    /sbin/mdadm              /sbin/mdadm                         755 0 0

file    /etc/mdadm.conf          /etc/mdadm.conf                     755 0 0

# our init script
file    /init                    /usr/src/initramfs/init             755 0 0


mdadm is built statically, and mdadm.conf contains:

Code:

DEVICE /dev/sd??*

ARRAY /dev/md0 metadata=1.2 UUID=7e077f14:d2571554:76e86aaa:0f82936a
ARRAY /dev/md1 metadata=1.2 UUID=8ab8e422:94e16775:694d5652:ea676e97
ARRAY /dev/md2 metadata=1.2 UUID=a53c28ee:a118bc53:702babff:8faaef9a
ARRAY /dev/md3 metadata=1.2 UUID=f6375cf5:ddb727d4:7c356dd0:5311d16f
.

My init script just adds the lines:
Code:

...
# mounting rootfs on /mnt/root
uuidlabel_root || rescue_shell "Error with uuidlabel_root"

# mounted root, spin up raid drives using our mdadm
/sbin/mdadm --assemble --scan /dev/md1


# space separated list of mountpoints that ...
mountpoints="/usr"

# ... we want to find in /etc/fstab ...
ln -s /mnt/root/etc/fstab /etc/fstab

...


Because to get to /usr, I need to activate the raid volume first, which is md1 (md0 is home, md2 and 3 are other directories) Actually, raid starts up and gives a message that md1 starts with two disks, but I have the problem everyone else seems to have with this - /sbin/fsck isn't found. All the fixes I have read say to change /lib to /lib64 and adjust accordingly, which I have done. Here is the output from my initramfs archive. (I named it genkernel so that grub-mkconfig -o /boot/grub2/grub.cfg would pick it up)

Code:

 cpio -idv < initramfs-genkernel-3.7.8                 
proc
usr
bin
sys
var
lib64
sbin
mnt
mnt/root
etc
root
dev
bin/busybox
lib64/ld-linux-86-64.so.2
lib64/libext2fs.so.2
lib64/libcom_err.so.2
lib64/libpthread.so.0
lib64/libblkid.so.1
lib64/libuuid.so.1
lib64/libe2p.so.2
lib64/libc.so.6
sbin/fsck
sbin/fsck.ext4
sbin/mdadm
etc/mdadm.conf
init
11826 blocks


It looks like everything is ok with that. Can someone tell me what step I missed? I have done this numerous times now with no luck, and the rescue shell isn't incredibly helpful (I'll need to work on that later) It looks as though it isn't finding libraries because the static mdadm works, but I haven't got a clue why.

Thanks.


Last edited by tenspd137 on Sun Feb 17, 2013 8:44 am; edited 1 time in total
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netfab
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PostPosted: Sat Feb 16, 2013 8:19 am    Post subject: Reply with quote

Please paste output of :
Code:

$ ldd /sbin/fsck.ext4
$ ldd /sbin/fsck
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NeddySeagoon
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PostPosted: Sat Feb 16, 2013 9:18 am    Post subject: Reply with quote

tenspd137
My initramfs_list on /no-multilib/ reads:-
Code:
# directory structure
dir /proc       755 0 0
dir /usr        755 0 0
dir /bin        755 0 0
dir /sys        755 0 0
dir /var        755 0 0
#dir /lib        755 0 0
dir /lib64      755 0 0
dir /sbin       755 0 0
dir /mnt        755 0 0
dir /mnt/root   755 0 0
dir /etc        755 0 0
dir /root       700 0 0
dir /dev        755 0 0

# busybox
file /bin/busybox /bin/busybox  755 0 0

# for raid on lvm
file /sbin/mdadm                /sbin/mdadm              755 0 0
file /sbin/lvm.static           /sbin/lvm.static         755 0 0

# libraries required by /sbin/fsck.ext4 and /sbin/fsck

slink   /lib                            /lib64                          777 0 0
file    /lib64/ld-linux-x86-64.so.2     /lib64/ld-linux-x86-64.so.2     755 0 0
file    /lib64/libext2fs.so.2           /lib64/libext2fs.so.2           755 0 0
file    /lib64/libcom_err.so.2          /lib64/libcom_err.so.2          755 0 0
file    /lib64/libpthread.so.0          /lib64/libpthread.so.0          755 0 0
file    /lib64/libblkid.so.1            /lib64/libblkid.so.1            755 0 0
file    /lib64/libuuid.so.1             /lib64/libuuid.so.1             755 0 0
file    /lib64/libe2p.so.2              /lib64/libe2p.so.2              755 0 0
file    /lib64/libc.so.6                /lib64/libc.so.6                755 0 0

file    /sbin/fsck              /sbin/fsck                      755 0 0
file    /sbin/fsck.ext4         /sbin/fsck.ext4                 755 0 0

# our init script
file    /init                   /root/initrd/init               755 0 0

Note that this does not use bb fsck.

My init script is
Code:
#!/bin/busybox sh

rescue_shell() {
    echo "$@"
    echo "Something went wrong. Dropping you to a shell."
    /bin/busybox --install -s
    exec /bin/sh
}

# allow the use of UUIDs or filesystem lables
uuidlabel_root() {
    for cmd in $(cat /proc/cmdline) ; do
        case $cmd in
        root=*)
            type=$(echo $cmd | cut -d= -f2)
            echo "Mounting rootfs"
            if [ $type == "LABEL" ] || [ $type == "UUID" ] ; then
                uuid=$(echo $cmd | cut -d= -f3)
                mount -o ro $(findfs "$type"="$uuid") /mnt/root
            else
                mount -o ro $(echo $cmd | cut -d= -f2) /mnt/root
            fi
            ;;
        esac
    done
}

check_filesystem() {
    # most of code coming from /etc/init.d/fsck

    local fsck_opts= check_extra= RC_UNAME=$(uname -s)

    # FIXME : get_bootparam forcefsck
    if [ -e /forcefsck ]; then
        fsck_opts="$fsck_opts -f"
        check_extra="(check forced)"
    fi

    echo "Checking local filesystem $check_extra : $1"

    if [ "$RC_UNAME" = Linux ]; then
        fsck_opts="$fsck_opts -C0 -T"
    fi

    trap : INT QUIT

    # using our own fsck, not the builtin one from busybox
    /sbin/fsck -p $fsck_opts $1

    ret_val=$?
    #case $? in

    case $ret_val in
        0)      return 0;;
        1)      echo "Filesystem repaired"; return 0;;
        2|3)    if [ "$RC_UNAME" = Linux ]; then
                        echo "Filesystem repaired, but reboot needed"
                        reboot -f
                else
                        rescue_shell "Filesystem still have errors; manual fsck required"
                fi;;
        4)      if [ "$RC_UNAME" = Linux ]; then
                        rescue_shell "Fileystem errors left uncorrected, aborting"
                else
                        echo "Filesystem repaired, but reboot needed"
                        reboot
                fi;;
        8)      echo "Operational error"; return 0;;
        16)     echo "Use or Syntax Error"; return 16;;
        32)     echo "fsck interrupted";;
        127)    echo "Shared Library Error"; sleep 20; return 0;;
        *)      echo $ret_val; echo "Some random fsck error - continuing anyway"; sleep 20; return 0;;
    esac

# rescue_shell can't find tty so its broken
    rescue_shell
}

# start for real here

# temporarily mount proc and sys
mount -t proc none /proc
mount -t sysfs none /sys
mount -t devtmpfs none /dev

# assemble the raid set(s) - they got renumbered from md1, md5 and md6
# /boot
/sbin/mdadm --assemble /dev/md125 /dev/sda1 /dev/sdb1 /dev/sdc1 /dev/sdd1
# don't care if /boot fails to assemble

# /  (root)  I wimped out of root on lvm for this box
/sbin/mdadm --assemble /dev/md126 /dev/sda5 /dev/sdb5 /dev/sdc5 /dev/sdd5 || rescue_shell
# if root won't assemble, we are stuck

# LVM for everything else
/sbin/mdadm --assemble /dev/md127 /dev/sda6 /dev/sdb6 /dev/sdc6 /dev/sdd6 || rescue_shell
# and if the LVM space won't assemble there is no /usr or /var so we are really in a mess
# TODO could auto cope with degraded raid operation

# lvm runs as whatever its called as
ln -s /sbin/lvm.static /sbin/vgchange
# start the vg volume group - we only have one volume group
/sbin/vgchange -ay vg || rescue_shell
# if this failed we have no /usr or /var

# get here with raid sets assembled and logical volumes available

# mounting rootfs on /mnt/root
uuidlabel_root || rescue_shell "Error with uuidlabel_root"

# space separated list of mountpoints that ...
mountpoints="/usr /var"

# ... we want to find in /etc/fstab ...
ln -s /mnt/root/etc/fstab /etc/fstab

# ... to check filesystems and mount our devices.
for m in $mountpoints ; do

#echo $m

    check_filesystem $m

    echo "Mounting $m"
    # mount the device and ...
    mount $m || rescue_shell "Error while mounting $m"

    # ... move the tree to its final location
    mount --move $m "/mnt/root"$m || rescue_shell "Error while moving $m"
done

echo "All done. Switching to real root."

# clean up. The init process will remount proc sys and dev later
umount /proc
umount /sys
umount /dev

# switch to the real root and execute init
exec switch_root /mnt/root /sbin/init

Remove the lvm stuff as you don't need it.
I don't use an mdadm.conf anywhere - I use the UUIDs of the raid set. That is not te same as the UUID of the filesystem on the raid set.
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Computer users fall into two groups:-
those that do backups
those that have never had a hard drive fail.
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tenspd137
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PostPosted: Sat Feb 16, 2013 5:16 pm    Post subject: Reply with quote

@netfab -

I am on a different computer right now, but the libraries in my list match.

@neddy

After using your script, it will boot, but I still get errors about /sbin/fsck - it tells me there is a shared library error - could it be because I am running a multilib configuration?
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NeddySeagoon
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PostPosted: Sat Feb 16, 2013 5:48 pm    Post subject: Reply with quote

tenspd137,

You are missing a library for fsck from your initrd, or its in the wrong path, so its not found.

Code:
 $ ldd /sbin/fsck
   linux-vdso.so.1 (0x00007ffffddff000)
   libmount.so.1 => /lib64/libmount.so.1 (0x00007fc86adab000)
   libblkid.so.1 => /lib64/libblkid.so.1 (0x00007fc86ab76000)
   libc.so.6 => /lib64/libc.so.6 (0x00007fc86a7cd000)
   /lib64/ld-linux-x86-64.so.2 (0x00007fc86afe4000)
   libuuid.so.1 => /lib64/libuuid.so.1 (0x00007fc86a5c8000)

shows the libraries and paths my fsck uses. If you get different results, you need to fix your file list.
Beware of the symlink trap. Some of those libraries may be symlinks.
If so, you need both the link and the real library it points to.

With the shared library error fsck does not run but it allows you to boot so you can fix it.
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NeddySeagoon

Computer users fall into two groups:-
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tenspd137
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PostPosted: Sun Feb 17, 2013 3:57 am    Post subject: Reply with quote

I finally found the problem - I had a typo in one of my files in the initramfs_list. All is good (finally).

Thanks for everyone's help.
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eurabilis
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PostPosted: Mon Sep 30, 2013 2:02 am    Post subject: May I shamelessly insert myself here I have the same issue! Reply with quote

Hello once again friends. I followed the tutorial https://wiki.gentoo.org/wiki/Early_Userspace_Mounting but I am getting
Code:
checking /usr... /sbin/fsck error while loading shared library libmount.so.1 filesystem could not be fixed. dropping you to a shell.
So after running ldd like I seen in this thread, I added this to initramfs_list..
Code:
file    /lib/libmount.so.1      /lib/libmount.so.1                  755 0 0
file    /lib/libmount.so.1.1.0  /lib/libmount.so.1.1.0              755 0 0
as thats where they are. But I am still getting the error. Any help is appreciated.


So you know I am only using an initrd because of the recent news here. I dont have any special setup whatsoever and haven't needed it until now.

Code:
2013-09-27-initramfs-required
  Title                     Separate /usr on Linux requires initramfs
  Author                    William Hubbs <williamh@gentoo.org>
  Posted                    2013-09-27
  Revision                  1

Linux systems which have / and /usr on separate file systems but do not
use an initramfs will not be supported starting on 01-Nov-2013.

If you have / and /usr on separate file systems and you are not
currently using an initramfs, you must set one up before this date.
Otherwise, at some point on or after this date, upgrading packages
will make your system unbootable.

For more information on setting up an initramfs, see this URL:

https://wiki.gentoo.org/wiki/Initramfs/HOWTO

I do have / and /usr on seperate partitions.
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init_6
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PostPosted: Mon Sep 30, 2013 6:24 am    Post subject: Re: Initramfs to mount seperate /usr - fsck fails[solved] Reply with quote

tenspd137 wrote:
Hi all,

I have /usr on a software raid volume (raid-1) and am using the instructions found:

http://wiki.gentoo.org/wiki/Early_Userspace_Mounting

to make an initramfs image. Since it is on raid and on a 64 bit system, I made the following changes to the initramfs_list:

(cut)

Thanks.


Try it initramfs
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netfab
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PostPosted: Mon Sep 30, 2013 7:07 am    Post subject: Reply with quote

@eurabilis : please paste your emerge --info and your initramfs_list file.
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PostPosted: Mon Sep 30, 2013 5:21 pm    Post subject: Reply with quote

Code:
gentoo mike # emerge --info

Portage 2.2.1 (default/linux/x86/13.0/desktop/kde, gcc-4.6.3, glibc-2.15-r3, 3.10.9 i686)
=================================================================
System uname: Linux-3.10.9-i686-Intel-R-_Pentium-R-_4_CPU_2.80GHz-with-gentoo-2.2
KiB Mem:     1027288 total,    259732 free
KiB Swap:     489944 total,    489944 free
Timestamp of tree: Sun, 29 Sep 2013 01:45:01 +0000
ld GNU ld (GNU Binutils) 2.23.1
app-shells/bash:          4.2_p45
dev-lang/python:          2.7.5-r2, 3.2.5-r2
dev-util/cmake:           2.8.10.2-r2
dev-util/pkgconfig:       0.28
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.11.8
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.11.6, 1.12.6, 1.13.4
sys-devel/binutils:       2.23.1
sys-devel/gcc:            4.6.3
sys-devel/gcc-config:     1.7.3
sys-devel/libtool:        2.4.2
sys-devel/make:           3.82-r4
sys-kernel/linux-headers: 3.9 (virtual/os-headers)
sys-libs/glibc:           2.15-r3
Repositories: gentoo proaudio
ACCEPT_KEYWORDS="x86"
ACCEPT_LICENSE="*"
CBUILD="i486-pc-linux-gnu"
CFLAGS="-O2 -march=i486 -pipe"
CHOST="i486-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -march=i486 -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -march=i686 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync"                                             
FFLAGS="-O2 -march=i686 -pipe"                                                                                                                               
GENTOO_MIRRORS="http://mirrors.rit.edu/gentoo/"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/var/lib/layman/pro-audio"
SYNC="rsync://rsync5.us.gentoo.org/gentoo-portage"
USE="X a52 aac acl acpi alsa apache2 berkdb bindist bluetooth branding bzip2 cairo cdda cdr cgi cleartype cli consolekit corefonts cracklib crypt curl cxx dbus declarative device-mapper dri dri2 dts dvd dvdr emboss emerald encode evdev exif extras fam fbcondecor firefox flac fortran ftp gd gdbm gif git gnutls gpm hal hash iconv innodb jpeg kde kdrive kipi lcms ldap libnotify mad mbox mng modules mp3 mp4 mpeg mudflap mysql mysqli ncurses nls nptl ogg opengl openmp pam pango pcre pdf pdo phonon php plasma png policykit ppds pulseaudio qt3support qt4 radeon readline samba sdl secure-delete semantic-desktop session simplexml sip soap spell sqlite ssl startup-notification static-libs subversion suhosin svg tcpd threads tidy tiff truetype type1 udev udisks unicode upower usb vorbis wav wxwidgets x264 x86 xcb xcomposite xinerama xml xml2 xscreensaver xv xvid zip zlib" ABI_X86="32" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="evdev keyboard mouse" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_2" RUBY_TARGETS="ruby19 ruby18" USERLAND="GNU" VIDEO_CARDS="radeon vesa" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, MAKEOPTS, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON

gentoo mike #


Code:
gentoo initramfs # more *list*
# directory structure
dir /proc       755 0 0
dir /usr        755 0 0
dir /bin        755 0 0
dir /sys        755 0 0
dir /var        755 0 0
dir /lib        755 0 0
dir /sbin       755 0 0
dir /mnt        755 0 0
dir /mnt/root   755 0 0
dir /etc        755 0 0
dir /root       700 0 0
dir /dev        755 0 0

# busybox
file /bin/busybox /bin/busybox 755 0 0

# libraries required by /sbin/fsck.ext4 and /sbin/fsck
file    /lib/libmount.so.1      /lib/libmount.so.1                  755 0 0
file    /lib/libmount.so.1.1.0  /lib/libmount.so.1.1.0              755 0 0
file    /lib/ld-linux.so.2      /lib/ld-linux.so.2                  755 0 0
file    /lib/libext2fs.so.2     /lib/libext2fs.so.2                 755 0 0
file    /lib/libcom_err.so.2    /lib/libcom_err.so.2                755 0 0
file    /lib/libpthread.so.0    /lib/libpthread.so.0                755 0 0
file    /lib/libblkid.so.1      /lib/libblkid.so.1                  755 0 0
file    /lib/libuuid.so.1       /lib/libuuid.so.1                   755 0 0
file    /lib/libe2p.so.2        /lib/libe2p.so.2                    755 0 0
file    /lib/libc.so.6          /lib/libc.so.6                      755 0 0

file    /sbin/fsck              /sbin/fsck                          755 0 0
file    /sbin/fsck.ext4         /sbin/fsck.ext4                     755 0 0

# our init script
file    /init                   /usr/src/initramfs/init             755 0 0

gentoo initramfs #


I added these two lines myself should I remove them.

Code:
file    /lib/libmount.so.1      /lib/libmount.so.1                  755 0 0
file    /lib/libmount.so.1.1.0  /lib/libmount.so.1.1.0              755 0 0


Thanks.
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PostPosted: Wed Oct 02, 2013 6:54 pm    Post subject: Bump Reply with quote

Bump
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eurabilis
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Joined: 22 Jun 2010
Posts: 66
Location: Warwick, Rhode island, USA

PostPosted: Sat Oct 05, 2013 10:20 pm    Post subject: Can someone help me out im stuck Reply with quote

Can someone help me out im stuck.
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