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tobbebobbe
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Joined: 10 Feb 2011
Posts: 24

PostPosted: Thu Feb 14, 2013 7:28 am    Post subject: Problems upgrading to gnome 3.6.2 Reply with quote

I have used previous versions of gnome 3 by mixing branches, using stable branch in general and gone thru a lot of hassle with package.keywords etc. When doing emerge -uDN world thus also pulling in gnome 3.6.2 I have now run into trouble. I thought that my problems originated from mixing branches, so I actually decided to go full ~x86 and entered that in make.conf. However, I still get the same error. Emerge pulls in dev-python/rdflib-3.2.3 which fails during compile time.

Here is emerge --info:

Quote:

Portage 2.1.11.50 (default/linux/x86/13.0/desktop/gnome, gcc-4.5.4, glibc-2.16.0, 2.6.31-gentoo-r6 i686)
=================================================================
System Settings
=================================================================
System uname: Linux-2.6.31-gentoo-r6-i686-Intel-R-_Core-TM-2_Duo_CPU_T5750_@_2.00GHz-with-gentoo-2.2
KiB Mem: 3114732 total, 1976048 free
KiB Swap: 0 total, 0 free
Timestamp of tree: Tue, 12 Feb 2013 20:15:01 +0000
ld GNU ld (GNU Binutils) 2.22
app-shells/bash: 4.2_p37
dev-java/java-config: 2.1.12-r1
dev-lang/python: 2.6.8, 2.7.3-r3, 3.1.4-r3, 3.2.3-r2
dev-util/cmake: 2.8.9
dev-util/pkgconfig: 0.28
sys-apps/baselayout: 2.2
sys-apps/openrc: 0.11.8
sys-apps/sandbox: 2.6
sys-devel/autoconf: 2.13, 2.69
sys-devel/automake: 1.9.6-r3, 1.10.3, 1.11.6
sys-devel/binutils: 2.22-r1
sys-devel/gcc: 4.4.5, 4.5.4, 4.6.3
sys-devel/gcc-config: 1.8
sys-devel/libtool: 2.4.2
sys-devel/make: 3.82-r4
sys-kernel/linux-headers: 3.7 (virtual/os-headers)
sys-libs/glibc: 2.16.0
Repositories: gentoo x-extensions-gnome ixtlan_overlay
ACCEPT_KEYWORDS="x86 ~x86"
ACCEPT_LICENSE="* -@EULA skype-4.0.0.7-copyright AdobeFlash-10.3 dlj-1.1 Oracle-BCLA-JavaSE"
CBUILD="i686-pc-linux-gnu"
CFLAGS="-O2 -march=native -pipe"
CHOST="i686-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -march=native -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -march=i686 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch"
FFLAGS="-O2 -march=i686 -pipe"
GENTOO_MIRRORS="http://ftp.df.lth.se/pub/gentoo/"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j3"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/var/lib/layman/extensions-gnome /usr/local/portage"
SYNC="rsync://rsync.nl.gentoo.org/gentoo-portage"
USE="X a52 aac acl acpi alsa berkdb bluetooth branding bzip2 cairo cdda cdr cli colord consolekit cracklib crypt cups cxx dbus dri dts dvd dvdr eds emboss encode evo exif fam firefox flac fortran gdbm gif gnome gnome-keyring gnome-online-accounts gpm gstreamer gtk iconv ipv6 java jpeg lcms ldap libnotify mad mng modules mp3 mp4 mpeg mudflap nautilus ncurses nls nptl nsplugin ogg opengl openmp pam pango pcre pdf png policykit ppds pulseaudio qt3support qt4 readline sdl session socialweb spell ssl startup-notification svg tcpd tiff truetype udev udisks unicode upower usb vorbis wxwidgets x264 x86 xcb xml xv xvid zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump" CAMERAS="ptp2 canon" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="evdev mouse synaptics" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" PHP_TARGETS="php5-3" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_2" RUBY_TARGETS="ruby18 ruby19" USERLAND="GNU" VIDEO_CARDS="radeon" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON


Build log:

Quote:

[32;01m * Package: dev-python/rdflib-3.2.3
 * Repository: gentoo
 * Maintainer: python@gentoo.org
 * USE: berkdb elibc_glibc kernel_linux userland_GNU x86
 * FEATURES: sandbox
>>> Unpacking source...
>>> Unpacking rdflib-3.2.3.tar.gz to /var/tmp/portage/dev-python/rdflib-3.2.3/work
>>> Source unpacked in /var/tmp/portage/dev-python/rdflib-3.2.3/work
>>> Preparing source in /var/tmp/portage/dev-python/rdflib-3.2.3/work/rdflib-3.2.3 ...
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/dev-python/rdflib-3.2.3/work/rdflib-3.2.3 ...
>>> Source configured.
>>> Compiling source in /var/tmp/portage/dev-python/rdflib-3.2.3/work/rdflib-3.2.3 ...
* Building of dev-python/rdflib-3.2.3 with CPython 2.6...
python2.6 setup.py build -b build-2.6
running build
running build_py
creating build-2.6
creating build-2.6/lib
creating build-2.6/lib/rdflib
copying rdflib/compare.py -> build-2.6/lib/rdflib
copying rdflib/query.py -> build-2.6/lib/rdflib
copying rdflib/graph.py -> build-2.6/lib/rdflib
copying rdflib/events.py -> build-2.6/lib/rdflib
copying rdflib/namespace.py -> build-2.6/lib/rdflib
copying rdflib/__init__.py -> build-2.6/lib/rdflib
copying rdflib/parser.py -> build-2.6/lib/rdflib
copying rdflib/py3compat.py -> build-2.6/lib/rdflib
copying rdflib/term.py -> build-2.6/lib/rdflib
copying rdflib/compat.py -> build-2.6/lib/rdflib
copying rdflib/exceptions.py -> build-2.6/lib/rdflib
copying rdflib/store.py -> build-2.6/lib/rdflib
copying rdflib/collection.py -> build-2.6/lib/rdflib
copying rdflib/util.py -> build-2.6/lib/rdflib
copying rdflib/serializer.py -> build-2.6/lib/rdflib
copying rdflib/resource.py -> build-2.6/lib/rdflib
copying rdflib/plugin.py -> build-2.6/lib/rdflib
creating build-2.6/lib/rdflib/plugins
copying rdflib/plugins/memory.py -> build-2.6/lib/rdflib/plugins
copying rdflib/plugins/__init__.py -> build-2.6/lib/rdflib/plugins
copying rdflib/plugins/sleepycat.py -> build-2.6/lib/rdflib/plugins
creating build-2.6/lib/rdflib/plugins/parsers
copying rdflib/plugins/parsers/notation3.py -> build-2.6/lib/rdflib/plugins/parsers
copying rdflib/plugins/parsers/rdfxml.py -> build-2.6/lib/rdflib/plugins/parsers
copying rdflib/plugins/parsers/trix.py -> build-2.6/lib/rdflib/plugins/parsers
copying rdflib/plugins/parsers/__init__.py -> build-2.6/lib/rdflib/plugins/parsers
copying rdflib/plugins/parsers/nquads.py -> build-2.6/lib/rdflib/plugins/parsers
copying rdflib/plugins/parsers/nt.py -> build-2.6/lib/rdflib/plugins/parsers
copying rdflib/plugins/parsers/ntriples.py -> build-2.6/lib/rdflib/plugins/parsers
creating build-2.6/lib/rdflib/plugins/parsers/rdfa
copying rdflib/plugins/parsers/rdfa/options.py -> build-2.6/lib/rdflib/plugins/parsers/rdfa
copying rdflib/plugins/parsers/rdfa/state.py -> build-2.6/lib/rdflib/plugins/parsers/rdfa
copying rdflib/plugins/parsers/rdfa/__init__.py -> build-2.6/lib/rdflib/plugins/parsers/rdfa
copying rdflib/plugins/parsers/rdfa/literal.py -> build-2.6/lib/rdflib/plugins/parsers/rdfa
copying rdflib/plugins/parsers/rdfa/embeddedrdf.py -> build-2.6/lib/rdflib/plugins/parsers/rdfa
copying rdflib/plugins/parsers/rdfa/parse.py -> build-2.6/lib/rdflib/plugins/parsers/rdfa
creating build-2.6/lib/rdflib/plugins/parsers/rdfa/transform
copying rdflib/plugins/parsers/rdfa/transform/headabout.py -> build-2.6/lib/rdflib/plugins/parsers/rdfa/transform
copying rdflib/plugins/parsers/rdfa/transform/__init__.py -> build-2.6/lib/rdflib/plugins/parsers/rdfa/transform
creating build-2.6/lib/rdflib/plugins/serializers
copying rdflib/plugins/serializers/rdfxml.py -> build-2.6/lib/rdflib/plugins/serializers
copying rdflib/plugins/serializers/trix.py -> build-2.6/lib/rdflib/plugins/serializers
copying rdflib/plugins/serializers/n3.py -> build-2.6/lib/rdflib/plugins/serializers
copying rdflib/plugins/serializers/__init__.py -> build-2.6/lib/rdflib/plugins/serializers
copying rdflib/plugins/serializers/nquads.py -> build-2.6/lib/rdflib/plugins/serializers
copying rdflib/plugins/serializers/nt.py -> build-2.6/lib/rdflib/plugins/serializers
copying rdflib/plugins/serializers/turtle.py -> build-2.6/lib/rdflib/plugins/serializers
copying rdflib/plugins/serializers/xmlwriter.py -> build-2.6/lib/rdflib/plugins/serializers
copying rdflib/plugins/serializers/trig.py -> build-2.6/lib/rdflib/plugins/serializers
warning: build_py: byte-compiling is disabled, skipping.
* Building of dev-python/rdflib-3.2.3 with CPython 3.1...
python3.1 setup.py build -b build-3.1
Traceback (most recent call last):
File "setup.py", line 34, in <module>
from setuptools import setup
ImportError: No module named setuptools
* ERROR: dev-python/rdflib-3.2.3 failed (compile phase):
* Building failed with CPython 3.1 in distutils_building() function
*
* Call stack:
* ebuild.sh, line 93: Called src_compile
* environment, line 3670: Called distutils_src_compile
* environment, line 998: Called python_execute_function 'distutils_building'
* environment, line 2052: Called die
* The specific snippet of code:
* die "${failure_message}";
*
* If you need support, post the output of `emerge --info '=dev-python/rdflib-3.2.3'`,
* the complete build log and the output of `emerge -pqv '=dev-python/rdflib-3.2.3'`.
* The complete build log is located at '/var/tmp/portage/dev-python/rdflib-3.2.3/temp/build.log'.
* The ebuild environment file is located at '/var/tmp/portage/dev-python/rdflib-3.2.3/temp/environment'.
* Working directory: '/var/tmp/portage/dev-python/rdflib-3.2.3/work/rdflib-3.2.3'
* S: '/var/tmp/portage/dev-python/rdflib-3.2.3/work/rdflib-3.2.3'


Please note, revdep-rebuild also pulls in this package. Any suggestions on how to fix this?
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Freeky
Tux's lil' helper
Tux's lil' helper


Joined: 11 Mar 2011
Posts: 129
Location: Novosibirsk, Russia

PostPosted: Thu Feb 14, 2013 5:11 pm    Post subject: Reply with quote

You have multiple installed versions of python: dev-lang/python: 2.6.8, 2.7.3-r3, 3.1.4-r3, 3.2.3-r2
Which one Do you use?
Code:
eselect python list

Some packages can't be compiled with python:3.1 and python:3.2
You should choose python:2.7 or python:2.6 using eselect then run
Code:
python-updater
for recompile all python packages.
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tobbebobbe
n00b
n00b


Joined: 10 Feb 2011
Posts: 24

PostPosted: Fri Feb 15, 2013 7:28 am    Post subject: Reply with quote

Thanks for your answer!

At the time of writing my first post python 2.6 was selected. Yesterday, before reading your post I changed to 2.7 (knowing that 3.x are discouraged) and ran $ python-updater. However, also python-updater gave me some problems, first trying to pull in packages which are masked and marked for deletion. I managed to re-emerge most of the packages in the list by hand though, and started a $ revdep-rebuild before leaving for work this morning.

Will be interesting to see if it went thru. If I had known how much time this would take I would just have backed up my data and done a fresh install instead! :)
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