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equaeghe
Apprentice
Joined: 22 Feb 2005
Posts: 258
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 Posted: Sun May 13, 2012 11:41 am Post subject: java errors while installing Matlab R2012a |
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Hi, I'm trying to install Matlab R2012a 64bit on my mostly stable amd64
system. Almost immediately I get the java errors shown at the end of this post. I'm using the following jre:
| Code: |
$ eselect java-vm list
Available Java Virtual Machines:
[1] icedtea-bin-6 system-vm user-vm
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Anybody have an idea what might be wrong?
| Code: |
Preparing installation files ...
Installing ...
Exception in thread "main" com.google.inject.ProvisionException: Guice provision errors:
1) Error in custom provider, java.lang.RuntimeException: java.lang.reflect.InvocationTargetException
at com.mathworks.wizard.WizardModule.provideDisplayProperties(WizardModule.java:60)
while locating com.mathworks.instutil.DisplayProperties
at com.mathworks.wizard.ui.components.ComponentsModule.providePaintStrategy(ComponentsModule.java:76)
while locating com.mathworks.wizard.ui.components.PaintStrategy
for parameter 4 at com.mathworks.wizard.ui.components.SwingComponentFactoryImpl.<init>(SwingComponentFactoryImpl.java:110)
while locating com.mathworks.wizard.ui.components.SwingComponentFactoryImpl
while locating com.mathworks.wizard.ui.components.SwingComponentFactory
for parameter 1 at com.mathworks.wizard.ui.WizardUIImpl.<init>(WizardUIImpl.java:65)
while locating com.mathworks.wizard.ui.WizardUIImpl
while locating com.mathworks.wizard.ui.WizardUI annotated with @com.google.inject.name.Named(value=BaseWizardUI)
at com.mathworks.wizard.ui.UIModule.provideWizardUI(UIModule.java:50)
while locating com.mathworks.wizard.ui.WizardUI
for parameter 0 at com.mathworks.wizard.ExceptionHandlerImpl.<init>(ExceptionHandlerImpl.java:22)
while locating com.mathworks.wizard.ExceptionHandlerImpl
while locating com.mathworks.wizard.ExceptionHandler
1 error
at com.google.inject.InjectorImpl$4.get(InjectorImpl.java:767)
at com.google.inject.InjectorImpl.getInstance(InjectorImpl.java:793)
at com.mathworks.wizard.WizardLauncher.startWizard(WizardLauncher.java:160)
at com.mathworks.wizard.WizardLauncher.start(WizardLauncher.java:75)
at com.mathworks.wizard.AbstractLauncher.launch(AbstractLauncher.java:27)
at com.mathworks.wizard.AbstractLauncher.launchStandalone(AbstractLauncher.java:18)
at com.mathworks.professionalinstaller.Launcher.main(Launcher.java:21)
Caused by: java.lang.RuntimeException: java.lang.reflect.InvocationTargetException
at com.google.inject.internal.ProviderMethod.get(ProviderMethod.java:106)
at com.google.inject.InternalFactoryToProviderAdapter.get(InternalFactoryToProviderAdapter.java:48)
at com.google.inject.InjectorImpl$4$1.call(InjectorImpl.java:758)
at com.google.inject.InjectorImpl.callInContext(InjectorImpl.java:811)
at com.google.inject.InjectorImpl$4.get(InjectorImpl.java:754)
at com.google.inject.spi.ProviderLookup$1.get(ProviderLookup.java:89)
at com.google.inject.spi.ProviderLookup$1.get(ProviderLookup.java:89)
at com.google.inject.internal.ProviderMethod.get(ProviderMethod.java:95)
at com.google.inject.InternalFactoryToProviderAdapter.get(InternalFactoryToProviderAdapter.java:48)
at com.google.inject.SingleParameterInjector.inject(SingleParameterInjector.java:42)
at com.google.inject.SingleParameterInjector.getAll(SingleParameterInjector.java:66)
at com.google.inject.ConstructorInjector.construct(ConstructorInjector.java:84)
at com.google.inject.ConstructorBindingImpl$Factory.get(ConstructorBindingImpl.java:111)
at com.google.inject.FactoryProxy.get(FactoryProxy.java:56)
at com.google.inject.SingleParameterInjector.inject(SingleParameterInjector.java:42)
at com.google.inject.SingleParameterInjector.getAll(SingleParameterInjector.java:66)
at com.google.inject.ConstructorInjector.construct(ConstructorInjector.java:84)
at com.google.inject.ConstructorBindingImpl$Factory.get(ConstructorBindingImpl.java:111)
at com.google.inject.FactoryProxy.get(FactoryProxy.java:56)
at com.google.inject.ProviderToInternalFactoryAdapter$1.call(ProviderToInternalFactoryAdapter.java:45)
at com.google.inject.InjectorImpl.callInContext(InjectorImpl.java:811)
at com.google.inject.ProviderToInternalFactoryAdapter.get(ProviderToInternalFactoryAdapter.java:42)
at com.google.inject.Scopes$1$1.get(Scopes.java:54)
at com.google.inject.InternalFactoryToProviderAdapter.get(InternalFactoryToProviderAdapter.java:48)
at com.google.inject.InjectorImpl$4$1.call(InjectorImpl.java:758)
at com.google.inject.InjectorImpl.callInContext(InjectorImpl.java:811)
at com.google.inject.InjectorImpl$4.get(InjectorImpl.java:754)
at com.google.inject.spi.ProviderLookup$1.get(ProviderLookup.java:89)
at com.google.inject.spi.ProviderLookup$1.get(ProviderLookup.java:89)
at com.google.inject.internal.ProviderMethod.get(ProviderMethod.java:95)
at com.google.inject.InternalFactoryToProviderAdapter.get(InternalFactoryToProviderAdapter.java:48)
at com.google.inject.ProviderToInternalFactoryAdapter$1.call(ProviderToInternalFactoryAdapter.java:45)
at com.google.inject.InjectorImpl.callInContext(InjectorImpl.java:811)
at com.google.inject.ProviderToInternalFactoryAdapter.get(ProviderToInternalFactoryAdapter.java:42)
at com.google.inject.Scopes$1$1.get(Scopes.java:54)
at com.google.inject.InternalFactoryToProviderAdapter.get(InternalFactoryToProviderAdapter.java:48)
at com.google.inject.SingleParameterInjector.inject(SingleParameterInjector.java:42)
at com.google.inject.SingleParameterInjector.getAll(SingleParameterInjector.java:66)
at com.google.inject.ConstructorInjector.construct(ConstructorInjector.java:84)
at com.google.inject.ConstructorBindingImpl$Factory.get(ConstructorBindingImpl.java:111)
at com.google.inject.FactoryProxy.get(FactoryProxy.java:56)
at com.google.inject.ProviderToInternalFactoryAdapter$1.call(ProviderToInternalFactoryAdapter.java:45)
at com.google.inject.InjectorImpl.callInContext(InjectorImpl.java:811)
at com.google.inject.ProviderToInternalFactoryAdapter.get(ProviderToInternalFactoryAdapter.java:42)
at com.google.inject.Scopes$1$1.get(Scopes.java:54)
at com.google.inject.InternalFactoryToProviderAdapter.get(InternalFactoryToProviderAdapter.java:48)
at com.google.inject.InjectorImpl$4$1.call(InjectorImpl.java:758)
at com.google.inject.InjectorImpl.callInContext(InjectorImpl.java:804)
at com.google.inject.InjectorImpl$4.get(InjectorImpl.java:754)
... 6 more
Caused by: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.lang.reflect.Method.invoke(Unknown Source)
at com.google.inject.internal.ProviderMethod.get(ProviderMethod.java:101)
... 54 more
Caused by: com.mathworks.instutil.JNIException: java.lang.UnsatisfiedLinkError: /tmp/mathworks_3746/bin/glnxa64/libinstutil.so: /tmp/mathworks_3746/bin/glnxa64/libstdc++.so.6: file too short
at com.mathworks.instutil.NativeUtility.loadNativeLibrary(NativeUtility.java:39)
at com.mathworks.instutil.NativeUtility.<init>(NativeUtility.java:24)
at com.mathworks.instutil.DisplayPropertiesImpl.<init>(DisplayPropertiesImpl.java:10)
at com.mathworks.wizard.WizardModule.provideDisplayProperties(WizardModule.java:67)
... 59 more
Caused by: java.lang.UnsatisfiedLinkError: /tmp/mathworks_3746/bin/glnxa64/libinstutil.so: /tmp/mathworks_3746/bin/glnxa64/libstdc++.so.6: file too short
at java.lang.ClassLoader$NativeLibrary.load(Native Method)
at java.lang.ClassLoader.loadLibrary0(Unknown Source)
at java.lang.ClassLoader.loadLibrary(Unknown Source)
at java.lang.Runtime.load0(Unknown Source)
at java.lang.System.load(Unknown Source)
at com.mathworks.instutil.NativeUtility.loadNativeLibrary(NativeUtility.java:37)
... 62 more
Finished
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vaxbrat
Guru
Joined: 05 Oct 2005
Posts: 407
Location: DC Burbs
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| Posted: Sun May 20, 2012 2:42 am Post subject: install the sun-jdk |
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Looks like your Matlab is hitting something different between icedtea and the sun-jdk. I called Mathworks a number of years back asking what sort of dependencies they had since I was installing it in a gentoo system. They pretty much only cited a major version of glibc and fessed up that they built the source on an RHEL4 system. This would have been around Matlab 2003a or b and when RHEL5 was just out or under 5.2 or so.
If you bring things forward to modern times, Matlab is probably built against RHEL5 now that RHEL6 is out. It also is probably built using the sun-jdk since that's what the "enterprise" uses for production java work. |
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equaeghe
Apprentice
Joined: 22 Feb 2005
Posts: 258
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| Posted: Sun May 20, 2012 1:05 pm Post subject: Re: install the sun-jdk |
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| vaxbrat wrote: | | Looks like your Matlab is hitting something different between icedtea and the sun-jdk. |
No such luck; changing to sun-jre-bin-1.6 gives the same error.
| vaxbrat wrote: | | I called Mathworks a number of years back asking what sort of dependencies they had since I was installing it in a gentoo system. |
I guess I'll go to the matlab newsgroup and see what comes out of that...
Thanks for your reply,
Erik |
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sera
Developer
Joined: 29 Feb 2008
Posts: 961
Location: CEST
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| Posted: Sun May 20, 2012 2:11 pm Post subject: |
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| Code: | | Caused by: java.lang.UnsatisfiedLinkError: /tmp/mathworks_3746/bin/glnxa64/libinstutil.so: /tmp/mathworks_3746/bin/glnxa64/libstdc++.so.6: file too short |
My first guess is you mounted /tmp noexec. Set java.io.tmpdir to something different, you can abuse _JAVA_OPTIONS for that, or simply remount /tmp exec. |
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