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sidkdbl07
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PostPosted: Tue May 31, 2005 5:01 pm    Post subject: DCM Images Reply with quote

I have some Dicom (.dcm) images that I nee to open. Does anybody know of a software that opens the dicom format?

I have tried Gimp, but have been unsuccessful.
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Z?
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Joined: 22 Jan 2003
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Location: Waterloo, Ontario, Canada

PostPosted: Sat Jun 11, 2005 2:19 pm    Post subject: Reply with quote

Wow. That was unexpected - it's not too often I hear somebody talking about DICOM outside of work...

I know that there's a PHP PEAR module that'll read 'em, and allow you to dump the DICOM info/pixel data to separate places, but it'd require writing a PHP script to do it. In Windows, there's a nifty program called DICOMWorks that's pretty slick, but I haven't heard of anything for Linux.

I'd definitely be interested in it, though...
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rukka
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PostPosted: Mon Jun 13, 2005 4:29 pm    Post subject: Reply with quote

Hello sidkdbl07 and Z?

For Dicom files (.dcm, .acr) you could try "display" from the media-gfx/imagemagick package, try the none-opensource x11-misc/xnview (never tried it) or just use The Gimp. By default Gentoo installs a dicom plugin (/usr/lib/gimp/2.0/plug-ins/dicom) but you have to load it manuelly. ;)

Have fun, bye: rukka
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sidkdbl07
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PostPosted: Sat Jul 30, 2005 4:42 am    Post subject: Reply with quote

I could have swore I tried the Gimp without success before....

It works now though! Goodie!
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Flummi
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PostPosted: Thu Aug 18, 2005 4:13 pm    Post subject: Reply with quote

Maybe a little late, but I have been searching for a DICOM viewer and found this URL

http://www.psychology.nottingham.ac.uk/staff/cr1/dicom.html

Hope it helps...

Greetings

Flummi
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nutznboltz
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PostPosted: Sat Jul 14, 2007 2:43 pm    Post subject: Need Help with DICOM image files Reply with quote

Dear Loyal Gentooists,

I have received a CD-ROM containing important medical images of my good friend.

I am unable to read them since they are in DIACOM format.

http://www.sph.sc.edu/comd/rorden/dicom.html

Can someone please assist me with viewing them?

Thanks :)
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nixnut
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PostPosted: Sat Jul 14, 2007 2:56 pm    Post subject: Reply with quote

merged above post here.
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nutznboltz
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PostPosted: Sat Jul 14, 2007 10:36 pm    Post subject: Reply with quote

nixnut wrote:
merged above post here.


Strangely I started out by searching on "DICOM". Oh well... :?
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guid0
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PostPosted: Sat Jul 12, 2014 1:18 pm    Post subject: Reply with quote

I found myself in need of a DICOM viewer once again after a while. I got Ginkgo to work once on a non-gentoo (read ubuntu) system which has been reinstalled many times after now.

http://ginkgo-cadx.com/en/

Gonna try again on my gentoo box now. Perhaps this application will make its way into portage one day :)
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gerard82
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PostPosted: Sat Jul 12, 2014 6:38 pm    Post subject: Reply with quote

@guid0,
Gimp-2.8.10 will open them.
It's in portage,checked it on my own box.
Gerard.
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The same disk can be used for 32 and 64 bit installs.
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guid0
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PostPosted: Sun Jul 13, 2014 8:12 am    Post subject: Reply with quote

Seems that my Gimp cannot handle the images. Not sure if im missing a useflag:

Code:
[ebuild   R    ] media-gfx/gimp-2.8.10-r1:2  USE="alsa bzip2 dbus exif jpeg mmx png postscript python sse svg tiff -aalib (-altivec) (-aqua) -curl -debug -doc -gnome -jpeg2k -lcms -mng -pdf -smp -udev -webkit -wmf -xpm" LINGUAS="en_GB nl -am -ar -ast -az -be -bg -br -ca -ca@valencia -cs -csb -da -de -dz -el -en_CA -eo -es -et -eu -fa -fi -fr -ga -gl -gu -he -hi -hr -hu -id -is -it -ja -ka -kk -km -kn -ko -lt -lv -mk -ml -ms -my -nb -nds -ne -nn -oc -pa -pl -pt -pt_BR -ro -ru -rw -si -sk -sl -sr -sr@latin -sv -ta -te -th -tr -tt -uk -vi -xh -yi -zh_CN -zh_HK -zh_TW" PYTHON_SINGLE_TARGET="python2_7 (-python2_6%)" PYTHON_TARGETS="python2_7 (-python2_6%)" 19,868 kB


Gimp throws me the following combined errormessage:

Code:
DICOM image Message: '/mnt/cdrom/0000000006494400/0000000006581323/im_14/x0000.dcm' has a bpp of 0 which GIMP cannot handle.
GIMP Message : Opening '/mnt/cdrom/0000000006494400/0000000006581323/im_14/x0000.dcm' failed: Procedure 'file-dicom-load' returned no return values


And getting Ginkgo-CADx to build is stuck at detecting the portage-installed ITK. :(
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gerard82
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PostPosted: Sun Jul 13, 2014 1:18 pm    Post subject: Reply with quote

This is what I get:
Code:

[ebuild   R    ] media-gfx/gimp-2.8.10-r1:2  USE="aalib alsa bzip2 dbus doc exif jpeg jpeg2k lcms mmx mng pdf png postscript python smp sse svg tiff udev webkit (-altivec) (-aqua) -curl -debug -gnome -wmf -xpm" LINGUAS="nl -am -ar -ast -az -be -bg -br -ca -ca@valencia -cs -csb -da -de -dz -el -en_CA -en_GB -eo -es -et -eu -fa -fi -fr -ga -gl -gu -he -hi -hr -hu -id -is -it -ja -ka -kk -km -kn -ko -lt -lv -mk -ml -ms -my -nb -nds -ne -nn -oc -pa -pl -pt -pt_BR -ro -ru -rw -si -sk -sl -sr -sr@latin -sv -ta -te -th -tr -tt -uk -vi -xh -yi -zh_CN -zh_HK -zh_TW" PYTHON_SINGLE_TARGET="python2_7 (-python2_6%)" PYTHON_TARGETS="python2_7 (-python2_6%)" 0 kB

Total: 1 package (1 reinstall), Size of downloads: 0 kB
ikke@localhost ~ $

As you can see I have a lot more flags enabled.

I tried to find DICOM files on the internet but don't know how to d/l them.

When I do "File Open" in Gimp I get a window with in the bottom right a button "All Files" or "All Images".
When I click it I get a dropdown menu with all the filetypes gimp can open.
It contains "DICOM image (*.dcm *.dicom)"

According to what I found on the internet Gimp and Imagemagick are Linux programs that can open them.

Sorry if this doesn't help.
Gerard.

.
_________________
To install Gentoo I use sysrescuecd.Based on Gentoo,has firefox to browse Gentoo docs and mc to browse (and edit) files.
The same disk can be used for 32 and 64 bit installs.
You can follow the Handbook verbatim.
http://www.sysresccd.org/Download
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guid0
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PostPosted: Sun Jul 13, 2014 1:55 pm    Post subject: Reply with quote

Tnx for the response. Much appreciated!

I changed my useflags to match your but it did unfortunately not seem to help. I noticed that the Gimp is able to open some files, but far from all. About 1 in 25 images.

Guess im gonna spend some more time in getting Ginkgo-CADx to compile :)
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mjpan
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PostPosted: Mon Jul 14, 2014 9:43 pm    Post subject: Reply with quote

try this viewer that works in your web browser.
http://jackimaging.com/demo
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guid0
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PostPosted: Tue Jul 15, 2014 6:57 am    Post subject: Reply with quote

Thanks for the suggestion but using a on-line service would have too much of an impact on privacy.
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