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[SOLVED] Emerge of python-3.2.5-r1 fails
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tmb
n00b
n00b


Joined: 03 Jun 2003
Posts: 28

PostPosted: Sun Jul 07, 2013 9:12 pm    Post subject: [SOLVED] Emerge of python-3.2.5-r1 fails Reply with quote

Hm, there seems to be a length limit on the posts even if everything shows in the preview. Strange...

Normally i can solve all problems with my knowledge of Gentoo and/or this forum/google but this one has me stumped. Any help would be appreciated.

Current Python versions installed:
Code:

Available Python interpreters:
  [1]   python2.4
  [2]   python2.5
  [3]   python2.6
  [4]   python2.7 *
  [5]   python3.1
  [6]   python3.2


emerge --info '=dev-lang/python-3.2.5-r1'

Code:
Portage 2.1.12.2 (default/linux/x86/13.0, gcc-4.6.3, glibc-2.15-r3, 3.2.12-gentoo i686)
=================================================================
                        System Settings
=================================================================
System uname: Linux-3.2.12-gentoo-i686-AMD_Sempron-tm-_Processor_2800+-with-gentoo-2.2
KiB Mem:      190224 total,     78512 free
KiB Swap:    2000340 total,   1991232 free
Timestamp of tree: Sun, 07 Jul 2013 11:30:01 +0000
ld GNU ld (GNU Binutils) 2.23.1
app-shells/bash:          4.2_p45
dev-java/java-config:     1.3.7-r1, 2.1.6-r1
dev-lang/python:          2.4.6, 2.5.4-r5, 2.6.8-r1, 2.7.3-r3, 3.1.5-r1, 3.2.3-r2
dev-util/pkgconfig:       0.28
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.11.8
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.13::<unknown repository>, 2.69
sys-devel/automake:       1.4_p6::<unknown repository>, 1.5::<unknown repository>, 1.6.3::<unknown repository>, 1.7.9-r1::<unknown repository>, 1.8.5-r3::<unknown repository>, 1.9.6-r2::<unknown repository>, 1.10.2, 1.11.1, 1.12.6
sys-devel/binutils:       2.23.1
sys-devel/gcc:            4.6.3
sys-devel/gcc-config:     1.7.3
sys-devel/libtool:        1.4.3-r4::<unknown repository>, 2.4-r1
sys-devel/make:           3.82-r4
sys-kernel/linux-headers: 3.7 (virtual/os-headers)
sys-libs/glibc:           2.15-r3
Repositories: gentoo
ACCEPT_KEYWORDS="x86"
ACCEPT_LICENSE="* -@EULA"
CBUILD="i686-pc-linux-gnu"
CFLAGS="-march=athlon-xp -O3 -pipe"
CHOST="i686-pc-linux-gnu"
CONFIG_PROTECT="/etc"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.3/ext-active/ /etc/php/apache2-php5.4/ext-active/ /etc/php/cgi-php5.3/ext-active/ /etc/php/cgi-php5.4/ext-active/ /etc/php/cli-php5.3/ext-active/ /etc/php/cli-php5.4/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -march=i686 -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -march=i686 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms splitdebug strict unknown-features-warn unmerge-logs unmerge-orphans userfetch"
FFLAGS="-O2 -march=i686 -pipe"
GENTOO_MIRRORS="http://gentoo.osuosl.org http://www.ibiblio.org/pub/Linux/distributions/gentoo"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j2"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY=""
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="acl berkdb bzip2 cgi cli cracklib crypt cxx dri fortran fpm gdbm gpm iconv modules mudflap ncurses nls nptl nptlonly openmp pam pcre php readline session ssl tcpd unicode x86 zlib" ABI_X86="32" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-4" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_2" RUBY_TARGETS="ruby19 ruby18" USERLAND="GNU" VIDEO_CARDS="fbdev glint intel mach64 mga nouveau nv r128 radeon savage sis tdfx trident vesa via vmware dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON


emerge -pqv '=dev-lang/python-3.2.5-r1

Code:
[ebuild     U ] dev-lang/python-3.2.5-r1 [3.2.3-r2] USE="gdbm ncurses readline ssl threads (wide-unicode) xml -build -doc -examples -hardened -ipv6 -sqlite -tk -wininst"


/var/tmp/portage/dev-lang/python-3.2.5-r1/temp/build.log

Code:

 * Package:    dev-lang/python-3.2.5-r1
 * Repository: gentoo
 * Maintainer: python@gentoo.org
 * USE:        abi_x86_32 elibc_glibc gdbm kernel_linux ncurses readline ssl threads userland_GNU wide-unicode x86 xml
 * FEATURES:   preserve-libs sandbox splitdebug
 * Applying various patches (bugfixes/updates) ...
 *   01_all_static_library_location.patch ...
 [ ok ]
 *   02_all_disable_modules_and_ssl.patch ...
 [ ok ]
 *   03_all_libdir.patch ...
 [ ok ]
 *   04_all_non-zero_exit_status_on_failure.patch ...
 [ ok ]
 *   05_all_regenerate_platform-specific_modules.patch ...
 [ ok ]
 *   21_all_distutils_c++.patch ...
 [ ok ]
 *   22_all_tests_environment.patch ...
 [ ok ]
 *   23_all_h2py_encoding.patch ...
 [ ok ]
 *   Skipping 41_all_crosscompile.patch due to EPATCH_EXCLUDE ...
 *   61_all_process_data.patch ...
 [ ok ]
 * Done with patching
 * Applying python-3.2-CVE-2013-2099.patch ...
 [ ok ]
 * Running autoconf ...
 [ ok ]
 * Running autoheader ...
 [ ok ]
 * Disabled modules:  _sqlite3 _tkinter
checking for --enable-universalsdk... no
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checking MACHDEP... linux2
checking machine type as reported by uname -m... i686
checking for --without-gcc... no
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checking whether the C compiler works... yes
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checking whether we are using the GNU C compiler... yes
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checking for i686-pc-linux-gnu-gcc option to accept ISO C89... none needed
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checking how to run the C preprocessor... i686-pc-linux-gnu-gcc -E
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checking LINKCC... $(PURIFY) $(MAINCC)
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checking for round... yes
checking for tgamma... yes
checking whether isinf is declared... yes
checking whether isnan is declared... yes
checking whether isfinite is declared... yes
checking whether tanh preserves the sign of zero... yes
checking whether log1p drops the sign of negative zero... no
checking whether POSIX semaphores are enabled... yes
checking for broken sem_getvalue... no
checking digit size for Python's longs... no value specified
checking wchar.h usability... yes
checking wchar.h presence... yes
checking for wchar.h... yes
checking size of wchar_t... 4
checking for UCS-4 tcl... no
checking whether wchar_t is signed... yes
checking what type to use for str... unsigned long
checking whether byte ordering is bigendian... no
checking ABIFLAGS...
checking SOABI... cpython-32
checking LDVERSION... $(VERSION)$(ABIFLAGS)
checking whether right shift extends the sign bit... yes
checking for getc_unlocked() and friends... yes
checking how to link readline libs... -lreadline
checking for rl_callback_handler_install in -lreadline... yes
checking for rl_pre_input_hook in -lreadline... yes
checking for rl_completion_display_matches_hook in -lreadline... yes
checking for rl_completion_matches in -lreadline... yes
checking for broken nice()... yes
checking for broken poll()... no
checking for struct tm.tm_zone... (cached) yes
checking for working tzset()... yes
checking for tv_nsec in struct stat... yes
checking for tv_nsec2 in struct stat... no
checking whether mvwdelch is an expression... yes
checking whether WINDOW has _flags... yes
checking for is_term_resized... yes
checking for resize_term... yes
checking for resizeterm... yes
checking for /dev/ptmx... yes
checking for /dev/ptc... no
checking for %lld and %llu printf() format support... yes
checking for %zd printf() format support... yes
checking for socklen_t... yes
checking for broken mbstowcs... no
checking whether i686-pc-linux-gnu-gcc -pthread supports computed gotos... yes
checking for --with-computed-gotos... yes
checking for pipe2... yes
checking for build directories... done
configure: creating ./config.status
config.status: creating Makefile.pre
config.status: creating Modules/Setup.config
config.status: creating Misc/python.pc
config.status: creating Modules/ld_so_aix
config.status: creating pyconfig.h
creating Modules/Setup
creating Modules/Setup.local
creating Makefile

<cut for brevity>

ar rc libpython3.2.a Parser/acceler.o Parser/grammar1.o Parser/listnode.o Parser/node.o Parser/parser.o Parser/parsetok.o Parser/bitset.o Parser/metagrammar.o Parser/firstsets.o Parser/grammar.o Parser/pgen.o Parser/myreadline.o Parser/tokenizer.o
ar rc libpython3.2.a Objects/abstract.o Objects/accu.o Objects/boolobject.o Objects/bytes_methods.o Objects/bytearrayobject.o Objects/bytesobject.o Objects/cellobject.o Objects/classobject.o Objects/codeobject.o Objects/complexobject.o Objects/descrobject.o Objects/enumobject.o Objects/exceptions.o Objects/genobject.o Objects/fileobject.o Objects/floatobject.o Objects/frameobject.o Objects/funcobject.o Objects/iterobject.o Objects/listobject.o Objects/longobject.o Objects/dictobject.o Objects/memoryobject.o Objects/methodobject.o Objects/moduleobject.o Objects/object.o Objects/obmalloc.o Objects/capsule.o Objects/rangeobject.o Objects/setobject.o Objects/sliceobject.o Objects/structseq.o Objects/tupleobject.o Objects/typeobject.o Objects/unicodeobject.o Objects/unicodectype.o Objects/weakrefobject.o
ar rc libpython3.2.a Python/_warnings.o Python/Python-ast.o Python/asdl.o Python/ast.o Python/bltinmodule.o Python/ceval.o Python/compile.o Python/codecs.o Python/dynamic_annotations.o Python/errors.o Python/frozen.o Python/frozenmain.o Python/future.o Python/getargs.o Python/getcompiler.o Python/getcopyright.o Python/getplatform.o Python/getversion.o Python/graminit.o Python/import.o Python/importdl.o Python/marshal.o Python/modsupport.o Python/mystrtoul.o Python/mysnprintf.o Python/peephole.o Python/pyarena.o Python/pyctype.o Python/pyfpe.o Python/pymath.o Python/pystate.o Python/pythonrun.o Python/pytime.o Python/random.o Python/structmember.o Python/symtable.o Python/sysmodule.o Python/traceback.o Python/getopt.o Python/pystrcmp.o Python/pystrtod.o Python/dtoa.o Python/formatter_unicode.o Python/fileutils.o Python/dynload_shlib.o   Python/thread.o
ar rc libpython3.2.a Modules/config.o Modules/getpath.o Modules/main.o Modules/gcmodule.o
ar rc libpython3.2.a Modules/_threadmodule.o  Modules/signalmodule.o  Modules/posixmodule.o  Modules/errnomodule.o  Modules/pwdmodule.o  Modules/_sre.o  Modules/_codecsmodule.o  Modules/_weakref.o  Modules/_functoolsmodule.o  Modules/operator.o  Modules/_collectionsmodule.o  Modules/itertoolsmodule.o  Modules/_localemodule.o  Modules/_iomodule.o Modules/iobase.o Modules/fileio.o Modules/bytesio.o Modules/bufferedio.o Modules/textio.o Modules/stringio.o  Modules/zipimport.o  Modules/symtablemodule.o  Modules/xxsubtype.o
i686-pc-linux-gnu-ranlib libpython3.2.a
i686-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,--as-needed -L.  -Wl,--no-as-needed -o libpython3.so -Wl,-hlibpython3.so libpython3.2.so
i686-pc-linux-gnu-gcc -pthread -Wl,-O1 -Wl,--as-needed -L.  -Xlinker -export-dynamic -o python Modules/python.o -L. -lpython3.2 -lpthread -ldl  -lutil   -lm 
i686-pc-linux-gnu-gcc -pthread -Wl,-O1 -Wl,--as-needed -L.  -Xlinker -export-dynamic -o Modules/_testembed Modules/_testembed.o -L. -lpython3.2 -lpthread -ldl  -lutil   -lm 
/bin/sh: line 5: 29587 Segmentation fault      LD_LIBRARY_PATH=/var/tmp/portage/dev-lang/python-3.2.5-r1/work/i686-pc-linux-gnu: CC='i686-pc-linux-gnu-gcc -pthread' LDSHARED='i686-pc-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,--as-needed -L. ' CFLAGS=' -DNDEBUG  -march=athlon-xp -O3 -pipe -fwrapv  ' ./python -E /var/tmp/portage/dev-lang/python-3.2.5-r1/work/Python-3.2.5/setup.py $quiet build
make: *** [sharedmods] Error 139
 * ERROR: dev-lang/python-3.2.5-r1 failed (compile phase):
 *   emake failed
 *
 * If you need support, post the output of `emerge --info '=dev-lang/python-3.2.5-r1'`,
 * the complete build log and the output of `emerge -pqv '=dev-lang/python-3.2.5-r1'`.
 * The complete build log is located at '/var/tmp/portage/dev-lang/python-3.2.5-r1/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/dev-lang/python-3.2.5-r1/temp/environment'.
 * Working directory: '/var/tmp/portage/dev-lang/python-3.2.5-r1/work/i686-pc-linux-gnu'
 * S: '/var/tmp/portage/dev-lang/python-3.2.5-r1/work/Python-3.2.5'


Last edited by tmb on Mon Jul 08, 2013 2:45 am; edited 2 times in total
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chithanh
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Joined: 05 Aug 2006
Posts: 1677
Location: Berlin, Germany

PostPosted: Sun Jul 07, 2013 10:37 pm    Post subject: Reply with quote

Some problems exist with certain python versions and CFLAGS="-O3". Try with -O2 instead.
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dwfreed
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Joined: 30 Jan 2013
Posts: 2

PostPosted: Sun Jul 07, 2013 11:24 pm    Post subject: Reply with quote

Of note, error 139 means the program segfaulted, which can often happen in complex programs compiled with -O3.
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tmb
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Joined: 03 Jun 2003
Posts: 28

PostPosted: Mon Jul 08, 2013 2:44 am    Post subject: Reply with quote

Haha, yes, that was it. -O2 did the trick. Would never have sussed this out on my own.

Thanks both for the the quick answers.
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